Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2286 ATGGTGCGTAATTTTCTTCTCATTGCAAGATTAACTGCATCGTTCACACACCACAGAAGTACCCCAATCCAATTGGGTTCTATGCTGCAACACAAACACAATGCTTCAATTTTTTTCTTCAATTCCTTCACTTCAGGAATCTCTTCTGATTCTGAATCAGATGATGAAAACCACCACAAAGGTGACACCTTTACTGTGTCTTACCTCATCAACTCATGGGGGTTGTCCCCAAGACGGGCCAGGGAAATCTCCAACAGGATCAATTTGAAAAACCCAGATGGCCCAAACGCTGTTATTGATCTTCTCAACAACTATGGGTTTGAAAAAACCCATCTTGCAAAACTTGTGGAGAGAAAGCCCTCAGTGCTTCTTGCGGATGCAGAGAATACCCTTTTGCCTAAACTCAAGTTCTTCCGTTCTATTGGGATTTCCAACACTGACATGCCTAAAATCCTAATTGCTAGCCATAATATGTTGTTCAGAAGCTTGAACAAATGCCTCATTCCACGGTATGAGATCCTAAAGAGTGTACTTCGTGACAAAGGGGAAGTTGTTAGAGCTTTGAAAAATGCCCCATTTAGTTTTACGTATGGTGACATGATGAAACGCTTGGTTCCAAACATTAGGGTTTTGAGGGAATCTGGTGTGCCTCAAGGTTCCATTTCTTATCTGTTGATGCATTCTGGGACTCTAGCCTACAGGGACCATTCCAAATTTGTGGAAGCTGTCAACACTGCTAAGGAATTTGGGTTTAATCCTTTGAGAAGAACTTTTGTCGTGGGTGTTGAAGTTCTTGCCATTAAGAGATGGGAATCAAGGTTTGAGGTTTATGAGAGGTGTGGCTGGAACCGCGAAATAGCTCTTCGAGCAGTTCGAAAGTTTCCCAGTGTTGTGAAGTTGTCAGAGGAAGTGTTTATAAAAAAAATGAGTTTTCTAGTGAAGGATATGGGTTGGCCATCAGAAGATATTGCTGAATATCCTCAAGTTGTAACGTACAACTTGGAGAAGAGGATTATCCCTAGATTCTCGGTAATCAAAATGTTGAAATCAAAAGGTCTGCTCAAGAATAATTTGCACTTTAGTGGCATTATTTGCATAACCGAGGCGAAGTTTTTGAAGAAATTTGTCATTAGTTTTCAGAAAGATTTGCCTTTCTTGCCAGATTTCTACAACAGTTTGGCAAATCAACAGAATGTATTATAG 1203 0.4048 MVRNFLLIARLTASFTHHRSTPIQLGSMLQHKHNASIFFFNSFTSGISSDSESDDENHHKGDTFTVSYLINSWGLSPRRAREISNRINLKNPDGPNAVIDLLNNYGFEKTHLAKLVERKPSVLLADAENTLLPKLKFFRSIGISNTDMPKILIASHNMLFRSLNKCLIPRYEILKSVLRDKGEVVRALKNAPFSFTYGDMMKRLVPNIRVLRESGVPQGSISYLLMHSGTLAYRDHSKFVEAVNTAKEFGFNPLRRTFVVGVEVLAIKRWESRFEVYERCGWNREIALRAVRKFPSVVKLSEEVFIKKMSFLVKDMGWPSEDIAEYPQVVTYNLEKRIIPRFSVIKMLKSKGLLKNNLHFSGIICITEAKFLKKFVISFQKDLPFLPDFYNSLANQQNVL* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2286 400 Gene3D Transcription termination factor 3, mitochondrial 180 383 IPR038538 -
Gso8g2286 400 Pfam mTERF 271 371 IPR003690 GO:0003690|GO:0006355
Gso8g2286 400 Pfam mTERF 99 252 IPR003690 GO:0003690|GO:0006355
Gso8g2286 400 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 29 392 - -
Gso8g2286 400 PANTHER CGI-12 PROTEIN-RELATED 29 392 IPR003690 GO:0003690|GO:0006355
Gso8g2286 400 SMART mt_12 149 180 IPR003690 GO:0003690|GO:0006355
Gso8g2286 400 SMART mt_12 185 217 IPR003690 GO:0003690|GO:0006355
Gso8g2286 400 SMART mt_12 113 144 IPR003690 GO:0003690|GO:0006355
Gso8g2286 400 SMART mt_12 320 354 IPR003690 GO:0003690|GO:0006355
Gso8g2286 400 SMART mt_12 288 319 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2286 Gso-Chr8 37034371 37039112 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso8g2286 mTERF 1.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2286 K15032 - gmx:102670177 777.319