Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2282 ATGCATATAGTTCGCTATTCTTTGGCTTCTCCACCACCATCACTCTTCTTCTCTTTCTCCTCTGCCATGGCTTTCTTCACCTATGCTTCAAACTCTAACCAATGCCCAAAACAAACCTTGTTGTTCATATTCACCATCTTCACCTTGTTCCATACACTCTTTACCACTGTAGAGTGCCTTTCCTTCAACTTTTCAACCTTCCAACCAAACTCCAATAATCTAATAGACTTTAAAGGTGATGCTTTTTCCTCACGCGGTGTTCTTCAGCTCACAAAGAACCAAATTGATGACAAAATCACATTCAGCGTTGGTCGAGCCTCGTATAACCAACAAGTGAGGCTTTGGGATAGAAGAACTAAGAAACTCACTGATTTCACAACCCATTTCTCTTTTGTCATGAAAGCTGTTGACCCTAAACGGTTTGGGGATGGGCTGGCCTTCTTCATTGCACCCTTTGATTCTGTTATTCCCAACAATTCAGCTGGTGGGTACCTTGGCCTATTCAGCAATGAATCCGCATTCAACATGAAGAAAAATCAGTTAGTTGCGGTTGAGTTCGACAGCTTCGAAAACGAATGGGATCCGAGCTCTGATCATGTTGGGATCGATGTCAACTCCATTCAATCCGTTACAAATGTCTCTTGGAAGAGCAGCATTAAGAACGGATCGGTCGCTAATGCTTGGATATGGTACAACTCTACAACCAAAAATCTCTCTGTGTTCCTTACTTATGCTGATAATCCAACTTTTAATGGCAATTCTAGTCTTTCTTATGTCATTGATTTGAGGGACGTGTTGCCAGAGCTTGTTAGAATAGGCTTTTCTGCTGCCACGGGTTCGTGGATTGAAGTGCACAACATTTTGTCTTGGTCATTCAGTTCAAACTTGGATGGGGATAATAGGAAAAAGGTTAAGGTTGGTTTAGTGGTTGGTTTAAGTGTTGGTTTGGGTTGTTGTTTAGTTTGTGTTGTAGGCCTATTATGGTTTACCTTTTGGAGAAGAAAAAATAAAGGAAAGGAGGAAAACTTAGGTGTTGATGCTTCTATAGATGATGAGTTTGAGAGAGGAACTGGTCCAAAGAGGTTCACCTATCGCGAACTAAGCAATGCAACCAACAACTTTGCAGAAGAAGGAAAGCTAGGAGAAGGAGGATTTGGAGGTGTTTACAAAGGCTTAGTTGTGAACTCAAACCTTGAAGTGGCAGTGAAGAGGGTTTCAAAAGGGTCAAAACAAGGGAAAAAGGAATATGTATCAGAAGTGAGAGTAATCAGCAGGCTAAGGCATAGAAACTTGGTTCAACTCATAGGGTGGTGCCATGAACAAGGTGAGCTCCTTCTTGTTTATGAATACATGCCTAATGGAAGCCTTGATTCTCATATATTTGGAAATAGAGTCATGCTTTCATGGGTGGTGAGACACAAGGTGGCTTTAGGTTTGGCATCTGCTCTTCTTTATCTTCATGAAGAGTGGGAACAATGTGTGGTGCATAGAGACATTAAGTCAAGTAATGTCATGTTGGATGCAAATTTCAATGCTAAACTTGGTGACTTCGGTCTTGCAAGGCTAGTAGACCATGAACTTGGTTCTCAAACCACTGTTTTGGCAGGCACAATGGGATACCTAGCCCCGGAATGTGTCACCACAGGGAAATCTAGCAAAGAGAGTGATGTGTACAGCTTTGGTGTTGTTGCACTTGAAATCACATGTGGTAGAAAACCAGTGGAAGTTAGAGAAGAGCCTAGTAAAGTAAGGCTTGTGGAGTGGGTGTGGAGCCTCTATGGAAAAGGGAAACTACTTGAAGCAGCTGATAAGAAACTGAATTGGGAATTTGAAGAACAGCAAATGGAATGTTTGATGATTGTGGGGTTGTGGTGTTGCCATCCTGATCATACCATGAGGCCATCCATTAGGCAAGTGATTAGTGTCCTTAACCTTGAAGCCCCTTTGCCAAGTCTTCCATCCAAGTTGCCTGTGCCAATGTATTATGCACCTCCAATGGATATGTGCAAATTCTCCTACACTTCATCTGGTGTTACAAGCACAACCAAAGAATCTTCTCCATACTCTTCAATGTCAGCTGGGTCCGGAAAATCTCTATTGTAG 2103 0.4218 MHIVRYSLASPPPSLFFSFSSAMAFFTYASNSNQCPKQTLLFIFTIFTLFHTLFTTVECLSFNFSTFQPNSNNLIDFKGDAFSSRGVLQLTKNQIDDKITFSVGRASYNQQVRLWDRRTKKLTDFTTHFSFVMKAVDPKRFGDGLAFFIAPFDSVIPNNSAGGYLGLFSNESAFNMKKNQLVAVEFDSFENEWDPSSDHVGIDVNSIQSVTNVSWKSSIKNGSVANAWIWYNSTTKNLSVFLTYADNPTFNGNSSLSYVIDLRDVLPELVRIGFSAATGSWIEVHNILSWSFSSNLDGDNRKKVKVGLVVGLSVGLGCCLVCVVGLLWFTFWRRKNKGKEENLGVDASIDDEFERGTGPKRFTYRELSNATNNFAEEGKLGEGGFGGVYKGLVVNSNLEVAVKRVSKGSKQGKKEYVSEVRVISRLRHRNLVQLIGWCHEQGELLLVYEYMPNGSLDSHIFGNRVMLSWVVRHKVALGLASALLYLHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVALEITCGRKPVEVREEPSKVRLVEWVWSLYGKGKLLEAADKKLNWEFEEQQMECLMIVGLWCCHPDHTMRPSIRQVISVLNLEAPLPSLPSKLPVPMYYAPPMDMCKFSYTSSGVTSTTKESSPYSSMSAGSGKSLL* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2282 700 PANTHER RECEPTOR LECTIN KINASE 51 676 - -
Gso8g2282 700 Gene3D - 58 309 - -
Gso8g2282 700 Pfam Protein kinase domain 375 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2282 700 MobiDBLite consensus disorder prediction 679 700 - -
Gso8g2282 700 ProSitePatterns Protein kinases ATP-binding region signature. 380 403 IPR017441 GO:0005524
Gso8g2282 700 CDD STKc_IRAK 388 644 - -
Gso8g2282 700 Pfam Legume lectin domain 60 301 IPR001220 GO:0030246
Gso8g2282 700 PANTHER - 51 676 - -
Gso8g2282 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Gso8g2282 700 SUPERFAMILY Protein kinase-like (PK-like) 358 672 IPR011009 -
Gso8g2282 700 CDD lectin_legume_LecRK_Arcelin_ConA 60 296 IPR001220 GO:0030246
Gso8g2282 700 Gene3D Phosphorylase Kinase; domain 1 359 450 - -
Gso8g2282 700 SMART serkin_6 374 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2282 700 ProSitePatterns Legume lectins beta-chain signature. 182 188 IPR019825 -
Gso8g2282 700 Gene3D Transferase(Phosphotransferase) domain 1 451 664 - -
Gso8g2282 700 SUPERFAMILY Concanavalin A-like lectins/glucanases 58 299 IPR013320 -
Gso8g2282 700 ProSiteProfiles Protein kinase domain profile. 374 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2282 Gso-Chr8 36884618 36886809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2282 40 662 Receptor kinase-like Gene Family AT5G10530 52.739 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso8g2282 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2282 - - gmx:100791518 1264.6