Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2266 ATGTCTCCGCCACTGCTGGTTACTGAAGAAGACGAAGGACAGAGCAATGCCTCGATGGTAGCATCTGCATCTTCACCCTCCTCGGAGTGTTTCACCCTAAATGAGGCTAGATTGAAAGAACGCAATTACCTGGGATTGTCAGATTGCTCTTCGGTGGACAGTTCTATTGTCCCGAGTTTGTCTGATGAGAAAAAGGAGAATCTGAATTTGAAGGCTACTGAGTTGAGGCTTGGACTTCCTGGATCCCAGTCACCTGAAAGGGATCCGGATCTTTTCTCGTTGAGCTCAACGAAACTCGATGAGAAGCCACTGTTCTCTTTGCTTCCTACAAAGGATGGAATCTGCTCACTGTCCCAAAAAACTGTGGTCTCAGGCAACAAAAGAGGTTTTGCTGACACAATTGACCCAGAGTTTCCTGGCAATGCAGGGATAAACATGATGCTATCACCTAAACCTTCTGGAGTTAAGCCTACCACAGTGAAAGAAATACCAAGCAAGGTATTACAAGAACATCCTTCTGCAGCAAATGGAACTGGTCATAACCATACGGGAGCTTCTATCAGTAGCAGTGCACCGGCTGCTAAGGCGCAAGTTGTTGGTTGGCCTCCTATAAGATCATTTAGGAAAAACTCATTGGCCACCACTTCAAAGAACAATGATGAAGTAGATGGAAAACCAGGTGCAGCTGCACTCTTTGTGAAGGTCAGCATGGATGGGGCTCCCTATCTGAGGAAGGTAGATCTAACAAATTATACAACGTACCGGGAACTGTCTTCTGCCCTTGAGAAAATGTTCAGCTGTTTCACTCTAGGTCAATGTGGTTCCCATGGAGCTCCAGGAAGAGAAATGTTGAGTGAGAGCAAGCTGAAGGACCTCCTGCACGGTTCGGAATATGTACTCACTTATGAAGATAAAGATGGTGACTGGATGCTTGTTGGAGATGTACCATGGGATATGTTCATCGACACATGCAAACGACTGAAAATCATGAAGGGTTCTGATGCTATTGGCTTAGCTCCCAGGGCCATGGAAAAATCCAGGAGCAGGTGCTAG 1053 0.4625 MSPPLLVTEEDEGQSNASMVASASSPSSECFTLNEARLKERNYLGLSDCSSVDSSIVPSLSDEKKENLNLKATELRLGLPGSQSPERDPDLFSLSSTKLDEKPLFSLLPTKDGICSLSQKTVVSGNKRGFADTIDPEFPGNAGINMMLSPKPSGVKPTTVKEIPSKVLQEHPSAANGTGHNHTGASISSSAPAAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGAAALFVKVSMDGAPYLRKVDLTNYTTYRELSSALEKMFSCFTLGQCGSHGAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWDMFIDTCKRLKIMKGSDAIGLAPRAMEKSRSRC* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2266 350 Pfam AUX/IAA family 73 341 IPR033389 -
Gso8g2266 350 MobiDBLite consensus disorder prediction 9 28 - -
Gso8g2266 350 ProSiteProfiles PB1 domain profile. 230 334 IPR000270 GO:0005515
Gso8g2266 350 SUPERFAMILY CAD & PB1 domains 230 331 - -
Gso8g2266 350 PANTHER AUXIN-INDUCED PROTEIN 13 343 - -
Gso8g2266 350 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 13 343 IPR003311 GO:0005634|GO:0006355
Gso8g2266 350 MobiDBLite consensus disorder prediction 1 28 - -
Gso8g2266 350 Gene3D - 226 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2266 Gso-Chr8 36313587 36318990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2266 233 329 B3 DNA Binding Superfamily AT2G46530 36.082 3.86e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gso8g2266 AUX_IAA 1.8e-90 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2266 K14484 - gmx:100789251 668.307