Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso8g2247 | ATGACCGAGTACCGGATGAACCTGTGGACCGACGACAACTCCTCCGTCATGGAGGCCTTCATGAGCTCCTCCGACCTCTCCTCCCTCTGGCTTGCCACGCCGCAGTCCGCCACCTCCACCACAACTCCAGGCACGGCAAAAGCCCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGGCGCAGTCCCAGTCCCTCCTCAACCAGGAGACTCTCCAGCAACGCCTCCAGACTCTCATCGAAGGCGCCTGCGAGAGCTGGACCTACGCAATCTTCTGGCAATCTTCCTACGACTATTCCTCCGGCACCTCCCTTCTCGGCTGGGGAGACGGTTACTACAAGGGCGAGGAGGACAAAGACAAAGTCAAAACCAAAGCCCCCAAAACGAGGTCGTCCGCAGAGCAGGACCATCGTAAGAAGGTCCTCCGCGAACTTAATTCCTTAATTTCCGGCCCTTCCGCTTCAGCTGACGACATTGACGAAGAAGTCACCGACACCGAGTGGTTCTTCCTGGTGTCGATGACTCAGTCCTTCGTCAACGGTAGCGGGCTGCCGGGCCAGGCTTTTTTTAACTCGAGCCCGGTCTGGGTCGCCGGGCCCGAAAGACTTTCCGAATCGGCCTGCGAACGGGCCCGCCAGGGGCAGCTCTTCGGGCTCCAGACTCTTGTCTGTATACCGTCCGCAAACGGCGTCGTCGAGCTCGCCTCCGCGGAGGTCATTTTTCAGAACCCCGATCTGATGAACAAGGTGCGTGATTTGTTCAACTTCAACAACAACAACAACAACAACAACCCTGAAACGTGTTCCTGGGCGTTGAATTGCGTTGCCACCACCGATCAAGGCGAGAACGACCCTTCCTCGCTCTGGCTCAACCCTGAAATCAAAGACTCCTCCACCGTCTCGCCGCCGAATTCCACGGTTAATAAGACGATGCATTTCGAAACCCCTGGTTCCAGTACCCTAACCGAAACCCCTAGCGCTGCTGCTGCTGTTCACGTCCCCAATTCTAAAAGCCAGGGATTCTTCCCGAGGGAATTGAACTTTTCGAATTCATTGAAACCTGAATCCGGTGAAATTCTGAGCTTTGGGGAGAGCAAGAAGAGCTCTTACAATGGGGCTTTCTTTCCCGGTGTTGTTGCGGTTGAGGAGAACAACAACAATAACAAGAACAAGAAGAAGAGGTCCCCGGTGGTTTCTCGGAGCAGCATTGACGATGGAATGCTTTCCTTCACTTCCCTGCCGGCTGCAAATATAAAATCAGTTAACGGTGCTTGTGTCGGTGCCGGTGATTCGGATCACTCGGATCTGGAAGCTTCCGTGGCGAAACAGGTGGTGGAGCCCGAGAAACGGCCCCGGAAGAGAGGGCGAAAGCCGGCTAACGGAAGAGAGGAACCACTAAATCATGTGGAAGCCGAGAGACAGAGGAGAGAAAAGCTGAACCAAAGATTCTATGCTCTACGAGCTGTAGTTCCAAATGTATCCAAGATGGACAAGGCATCGCTGTTGGGGGACGCCATATTGTACATTAACGAGTTGAAATCGAAGCTCAACGTGCTGGATTCAGAGAAAACGGAATTGGAGAAGCAATTGGATTCAACCAAGAAGGAACTCGAGCTCGCAACTAAAAACCCTCCTCCACCGCCACCGCCGCCACCACCACCAGGACCGCCTCCATCTAATAGCGTAGAACCAAAGAAGACAACAAGCAAGCTCGCTGATTTGGAGTTAGAGGTGAAGATCATTGGTTGGGATGCAATGGTAAGAATCCAATGCAGCAAGAAGAACCACCCTGCAGCCAGGTTGATGGCAGCATTGAAAGATCTTGACTTGGAAGTGCATCACGCCAGCGTGTCTGTGGTGAATGATTTGATGATCCAACAAGCCACGGTGAACATGGGAAACAAGTTTTACACGCAGGAACAGCTTCTGTCGGCACTATCATCCAAAGTTGGCGATGAACTACGATAG | 1965 | 0.5364 | MTEYRMNLWTDDNSSVMEAFMSSSDLSSLWLATPQSATSTTTPGTAKAPPPPPPPPPPPAQSQSLLNQETLQQRLQTLIEGACESWTYAIFWQSSYDYSSGTSLLGWGDGYYKGEEDKDKVKTKAPKTRSSAEQDHRKKVLRELNSLISGPSASADDIDEEVTDTEWFFLVSMTQSFVNGSGLPGQAFFNSSPVWVAGPERLSESACERARQGQLFGLQTLVCIPSANGVVELASAEVIFQNPDLMNKVRDLFNFNNNNNNNNPETCSWALNCVATTDQGENDPSSLWLNPEIKDSSTVSPPNSTVNKTMHFETPGSSTLTETPSAAAAVHVPNSKSQGFFPRELNFSNSLKPESGEILSFGESKKSSYNGAFFPGVVAVEENNNNNKNKKKRSPVVSRSSIDDGMLSFTSLPAANIKSVNGACVGAGDSDHSDLEASVAKQVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAILYINELKSKLNVLDSEKTELEKQLDSTKKELELATKNPPPPPPPPPPPGPPPSNSVEPKKTTSKLADLELEVKIIGWDAMVRIQCSKKNHPAARLMAALKDLDLEVHHASVSVVNDLMIQQATVNMGNKFYTQEQLLSALSSKVGDELR* | 655 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso8g2247 | 654 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 49 | 59 | - | - | |
Gso8g2247 | 654 | MobiDBLite | consensus disorder prediction | 540 | 560 | - | - | |
Gso8g2247 | 654 | PANTHER | MYC | 9 | 650 | IPR045084 | GO:0003700|GO:0006355 | |
Gso8g2247 | 654 | MobiDBLite | consensus disorder prediction | 435 | 472 | - | - | |
Gso8g2247 | 654 | MobiDBLite | consensus disorder prediction | 45 | 62 | - | - | |
Gso8g2247 | 654 | MobiDBLite | consensus disorder prediction | 538 | 567 | - | - | |
Gso8g2247 | 654 | Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 71 | 253 | IPR025610 | - | |
Gso8g2247 | 654 | CDD | bHLH_AtAIB_like | 459 | 535 | - | - | |
Gso8g2247 | 654 | MobiDBLite | consensus disorder prediction | 31 | 64 | - | - | |
Gso8g2247 | 654 | MobiDBLite | consensus disorder prediction | 115 | 136 | - | - | |
Gso8g2247 | 654 | Pfam | Helix-loop-helix DNA-binding domain | 466 | 511 | IPR011598 | GO:0046983 | |
Gso8g2247 | 654 | Coils | Coil | 508 | 542 | - | - | |
Gso8g2247 | 654 | Gene3D | - | 454 | 541 | IPR036638 | GO:0046983 | |
Gso8g2247 | 654 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 465 | 531 | IPR036638 | GO:0046983 | |
Gso8g2247 | 654 | PANTHER | TRANSCRIPTION FACTOR MYC2 | 9 | 650 | - | - | |
Gso8g2247 | 654 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 462 | 511 | IPR011598 | GO:0046983 | |
Gso8g2247 | 654 | SMART | finulus | 468 | 517 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso8g2247 | Gso-Chr8 | 35920939 | 35923389 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso8g2247 | 1 | 650 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT1G32640 | 54.948 | 0.0 | 625 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Gso8g2247 | bHLH-MYC_N | 1.4e-53 | CL0161 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso8g2247 | K13422 | - | gmx:100785708 | 1155.58 |