Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2246 ATGGCGTCCGATGGCTTTACCGACAAGAACACCGTGTTCAGAAAGCTCAAGGCGAAGTCTGAAAATAAGATGTGTTTCGATTGCAATGCGAAGAACCCTACCTGGGCGTCCGTCACGTATGGGATCTTTCTCTGCATCGATTGCTCCGCCGTTCACCGCAGTCTCGGCGTGCACATCAGCTTCGTGAGGTCTACAAATTTAGACTCATGGAGTCCTGAGCAACTAAAAACAATGAGCTTTGGAGGAAACAATCGTGCACAGGTTTTCTTTAAGCAACATGGTTGGAATGATGGTGGTAAAATAGAGGCTAAGTACACATCTAGAGCTGCAGACTTGTATAGGCAAATTCTTTCAAAGGAAGTTGCAAAAAGTATGGCTGAGGATGGAGGCTTGCCTTCATCACCTGTTGCTTCTCAGTCTTCCCAGGGGGTTAATGGGCTACCAGAAGTCAAGACCAATGAAGTGCCAAAAGAAAACATTCTGGAGAAGCCAGAAAAGCCTGAGAGCACTTCTTCCCCTAGAGCTTCACATACAGTAATTTCAAGTACTGTTAAGAAACCTATTGGTGCTAAGAAAGCAGTGAAGAGTGGGGGGCTCGGCGCTCGTAAACTCACTAAAAAGCCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTTTCATCTTCAACAAACAATATGCCTGCTGGGCCATCTCCAACGTCTCGGTTTGAGTATGTAGAAAATGTCCAATCATCTGAGTTGAACACTGGAGGTTCACATTTGCTTAGTCATGTGTCTCCACCAAAGTCATCAAGCTTCTTTGCAGACTTTGGAATGGATAGTGGCTTTCCAAAGAAATCTGGGCCAAGCTCCTCCAAAGTGCAAGAAACTGATGAAGCAAGAAGGAAGTTCTCAAATGCTAAATCTATTTCTTCATCCCAATATTTTGGAGATCAGAACAAGGCTGCAGATGTGGATTCTCAAGCTACTTTGTCTAAGTTTTCGGGTTCAAGTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGACAACAACATTGATCTTACTGCTGGTGACCTCATCAATCGATTATCTTTCCAGGCACAACAGGATCTCTCTTCCCTTAAGAACATTGCAGGAGAGACTGGAAAGAAGCTGAGCTCATTGGCCTCCACATTGATGACAGATCTTCAGGACCGAATCCTCTAA 1206 0.4519 MASDGFTDKNTVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLKTMSFGGNNRAQVFFKQHGWNDGGKIEAKYTSRAADLYRQILSKEVAKSMAEDGGLPSSPVASQSSQGVNGLPEVKTNEVPKENILEKPEKPESTSSPRASHTVISSTVKKPIGAKKAVKSGGLGARKLTKKPSESLYEQKPEEPPAPVSSSTNNMPAGPSPTSRFEYVENVQSSELNTGGSHLLSHVSPPKSSSFFADFGMDSGFPKKSGPSSSKVQETDEARRKFSNAKSISSSQYFGDQNKAADVDSQATLSKFSGSSAISSADLFGDSRDNNIDLTAGDLINRLSFQAQQDLSSLKNIAGETGKKLSSLASTLMTDLQDRIL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2246 401 MobiDBLite consensus disorder prediction 274 320 - -
Gso8g2246 401 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD9-RELATED 1 401 - -
Gso8g2246 401 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 1 401 - -
Gso8g2246 401 SUPERFAMILY ArfGap/RecO-like zinc finger 11 125 IPR037278 -
Gso8g2246 401 Pfam Putative GTPase activating protein for Arf 11 105 IPR001164 GO:0005096
Gso8g2246 401 Gene3D Arf GTPase activating protein 2 136 IPR038508 -
Gso8g2246 401 MobiDBLite consensus disorder prediction 133 148 - -
Gso8g2246 401 MobiDBLite consensus disorder prediction 221 241 - -
Gso8g2246 401 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Gso8g2246 401 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Gso8g2246 401 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Gso8g2246 401 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Gso8g2246 401 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Gso8g2246 401 CDD ArfGap_ArfGap2_3_like 8 123 - -
Gso8g2246 401 MobiDBLite consensus disorder prediction 126 241 - -
Gso8g2246 401 MobiDBLite consensus disorder prediction 304 320 - -
Gso8g2246 401 MobiDBLite consensus disorder prediction 155 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2246 Gso-Chr8 35826397 35832622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2246 13 91 C2H2 Transcription Factor Family AT4G21160 46.250 1.59e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2246 K12493 K11855 gmx:100785169 766.533