Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2225 ATGAGTGGTGGAAGGAGGAGGAAGCTGCTTTTAAGCAAGATCTACTCATTTGCATGCTGTAAGGCATCTTTTGAGGGAGATCATCATTATTCACAGATTGGAGGAAAAGGTTATTCCAGAGTGGTGTTCTGCAATGAGCCATATACTTTTGTTGAGGATGGTGTTAAGAATTTTGCAGACAATTCTGTGAGATCTACAAAATACACTCTTGCCACTTTCTTTCCCAAATCATTGTTTGAACAGTTTAGGAGAGTGGCAAACTTCTATTTTTTGGTCACTGGCATCTTGGCCTTCACAAAACTTGCTCCATACACTGCTGTCACTGCTATCCTTCCACTGATTATTGTTATTGGGGCCACCATGGTGAAAGAAGGTATTGAAGACTGGCACCGGAAAAAACAGGATATTGAGGTGAACAATAGAAGAGTTAAAGTGCATAAAGCTGATGATACTTTTGAATATACTGCATGGAAGAATCTGAGGGTGGGGAATATAGTGAAAGTTGAGAAGGATGAGTTCTTCCCAGCTGACCTCCTGTTACTTTCATCCAGTTATGAGGATGGAGTTTGCTATGTTGAGACCATGAACTTGGATGGTGAGACAAATTTAAAGTTAAAACAAGGGTTAGAGGTAACTTCTTCCTTACAGGAGGATCTCAACTTCCTAAAGTTTAAAGCTACAGTCAAATGTGAAGATCCAAATGCAAATTTGTACTCATTTGTTGGGAGCATGGAGTTTGAAGAGAAAAATTATGCCCTTTCTCATCAGCAACTTCTTCTCCGAGACTCTAAACTTCGTAATACAGACTACATTTTTGGAGCAGTCATTTTCACTGGTCATGACACTAAGGTTATTCAAAATTCTACTGACCCACCTTCAAAAAGAAGCAGAATTGAGAAAAAGATGGACAGAGTCATCTATTTCTTGTTTTGTATTTTATTCCTAATGGCATTTGTTGGATCTATTTTCTTTGGCATTATAACTAAAGATGACTTTCAAAATGGGTTGATGAAAAGATGGTATTTAAGACCAGATGGTTCTACTATTTTCTTTGATCCGAATAGACCAGCTGCTGCTGCTTTATTTCATTGTTTGACAGCCTTAATGTTATATGGGTTCTTTATTCCCATCTCTTTGTATGTGTCAATAGAAATTGTTAAAGTCCTTCAGAGCATTTTCATCAATCAAGATATCCATATGTACTACAAGGAAGCAGACAAACCAGCTCGAGCTCGTACTTCAAACTTGAATGAGGAGCTTGGCCAAGTTGATACATTACTTTCTGATAAGACTGGAACTTTGACCTGCAACTCAATGGAGTTCATTAAATGTTCTATTGCTGGGTTAGCTTATGGCCATGGCGCTACAGAGGTTGAGAAGGCCATGGATAGAAGAAAAGCTTCACCATCAATTTATGAGCATGATATTGAATCAGAAGCAGATAACATTAGGGGTTTGCTCGATAAAAGGGTACTCATTAAAGGTTTTAACTTTGCTGACGAAAGAATAACAAATGGAAATTGGGTTAATGAGCCTCATGCAGATGTTATCCAGAAGTTTTTTCGCCTATTGGCAGTCTGTCATACAGCCATACCCGAAGTGGATGAAGGCACAGGAAATGTCTCATATGAGGCTGAATCCCCAGATGAAGCAGCATTTGTGATTGCAGCAAGAGAACTTGGTTTTGAATTCTACAAAAGGGGTCAGACTAGTTTATCGACATATGAGCTGGATCCAGTTTCTCACAAGAAAGTTGAAAGGAAATACAAGCTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGGAAGATGAAGAAGGGAAAATTTTGCTTTTCTGCAAAGGTGCAGACAGCACCATGTTTGAAAGGCTTGCCAAGAATAGGAGGGAGTTTGAAGAGAAAACCATGGAGCATGTGCATGAGTATGCTGATGCGGGTCTGAGAACCCTTATACTGGCCTATCGTGAACTTGATGCAGAAGAATACAAGGAGTTTGATAGTAAATTCTCTAGGGCCAAGAATGTAGTCAGTGCTGATCAGGATATAATGATTGAGGAAGTATCAGATAAGATTGAGAAGAACCTAATTCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAGATGGGGTTCCTGAATGCATTGACAAGCTTGCCCAAGCAGGAATTAAAATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCAATCAATATTGGTTTTGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTGTAATTCATTTGGATAGTCCAGAAATTCAAGCACTAGAGAAGGATGGAGACAAGATGGCTATTGCCAAGGCATCAATGCAAAGTGTCCACCTTCAGATATCTGAAGGTGCTGCACAACTCACTGCATATAGAGGGAGCTCTCATCAGGCATTTGCTCTGATTATTGATGGAAAATCACTTGTTTATGCATTAGAAGATAATATGAAGAACTTGTTTCTGGAGCTTGCGATTCGTTGTGCATCTGTTATTTGCTGTCGCTCATCACCAAAGCAGAAGGCACTGGTCGCTAGATTGGTCAAATCTGGAGCTGGGAAAACAACATTAGCTATTGGTGATGGAGCCAACGATGTGGGAATGCTTCAAGAAGCGGATATAGGGGTTGGTATAAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCACAATTCAGGTATTTGGAACGGTTACTTCTGGTGCATGGACATTGGTGTTACCGGAGGATCTCATCTATGATATGCTATTTTTTCTACAAGAATATCACATTTGGTTTTACTCTATTCTTATATGAGGTGTATGCATCGTTCTCTGGACAACCTGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTTTTTTCATCACTTCCTGTGATTGCACTTGGAGTATTTGATCAGGATGTATCCGCTCGGTACTGCCTGAAGTTTCCTTTGTTACATCAAGAAGGAGTACAGAATGTTCTTTTCAGCTGGCATCGAATACTCAGTTGGATGCTTAATGGATTTATCAGTGCCATAATAATTTTCTTCTTCTGCACAAAAGCGATGGAGCTCCAGGCCTTCGATGTGGAGGGGAGAACTGCTGGAAAGGATATACTGGGAGCAACAATGTATACTTGTGTAGTTTGGGTTGTAAACTTGCAAGTGGCACTAGCTATAAGTTACTTCACCATGATCCAACATTTTTTCATCTGGGGTTCCATTCTTTTCTGGTATCTTTTTCTCCTGGTATATGGAGCAATGCCTCCACACTTTTCTACAAATGCTTACAAAGTCTTCGTTGAAGCTCTTGCTCCTTCCCCTTCCTATTGGATTGTTACATTCTTTGTGGTGATCTCAACCCTTATACCATACTTCTCATACGCAGCAATTCAGATGCGGTTCTTTCCCATGTATCATGAAATAGTGCAATGGATAAGGTATGAAGGGAAGATTAAGGATCCTGAGTTTTGTGCTATGGTGCGGCTGAAATCATTGCAGCCAACAACTGTTGGTTCAACAGCACGCTTAGCTGCTAAGTCTCACCACGCTAGAGACAAATGTTAA 3597 0.4006 MSGGRRRKLLLSKIYSFACCKASFEGDHHYSQIGGKGYSRVVFCNEPYTFVEDGVKNFADNSVRSTKYTLATFFPKSLFEQFRRVANFYFLVTGILAFTKLAPYTAVTAILPLIIVIGATMVKEGIEDWHRKKQDIEVNNRRVKVHKADDTFEYTAWKNLRVGNIVKVEKDEFFPADLLLLSSSYEDGVCYVETMNLDGETNLKLKQGLEVTSSLQEDLNFLKFKATVKCEDPNANLYSFVGSMEFEEKNYALSHQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIEKKMDRVIYFLFCILFLMAFVGSIFFGIITKDDFQNGLMKRWYLRPDGSTIFFDPNRPAAAALFHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYKEADKPARARTSNLNEELGQVDTLLSDKTGTLTCNSMEFIKCSIAGLAYGHGATEVEKAMDRRKASPSIYEHDIESEADNIRGLLDKRVLIKGFNFADERITNGNWVNEPHADVIQKFFRLLAVCHTAIPEVDEGTGNVSYEAESPDEAAFVIAARELGFEFYKRGQTSLSTYELDPVSHKKVERKYKLLNVLEFNSSRKRMSVIVEDEEGKILLFCKGADSTMFERLAKNRREFEEKTMEHVHEYADAGLRTLILAYRELDAEEYKEFDSKFSRAKNVVSADQDIMIEEVSDKIEKNLILLGATAVEDKLQDGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIVIHLDSPEIQALEKDGDKMAIAKASMQSVHLQISEGAAQLTAYRGSSHQAFALIIDGKSLVYALEDNMKNLFLELAIRCASVICCRSSPKQKALVARLVKSGAGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPLLHQEGVQNVLFSWHRILSWMLNGFISAIIIFFFCTKAMELQAFDVEGRTAGKDILGATMYTCVVWVVNLQVALAISYFTMIQHFFIWGSILFWYLFLLVYGAMPPHFSTNAYKVFVEALAPSPSYWIVTFFVVISTLIPYFSYAAIQMRFFPMYHEIVQWIRYEGKIKDPEFCAMVRLKSLQPTTVGSTARLAAKSHHARDKC* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2225 1198 Pfam Cation transport ATPase (P-type) 540 629 - -
Gso8g2225 1198 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1198 - -
Gso8g2225 1198 SUPERFAMILY HAD-like 422 924 IPR036412 -
Gso8g2225 1198 SUPERFAMILY Calcium ATPase, transduction domain A 144 286 IPR008250 -
Gso8g2225 1198 Gene3D - 705 909 IPR023214 -
Gso8g2225 1198 CDD P-type_ATPase_APLT_Dnf-like 60 1018 - -
Gso8g2225 1198 PRINTS P-type cation-transporting ATPase superfamily signature 427 441 - -
Gso8g2225 1198 PRINTS P-type cation-transporting ATPase superfamily signature 869 888 - -
Gso8g2225 1198 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 840 951 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso8g2225 1198 SFLD p-type atpase 411 920 IPR044492 -
Gso8g2225 1198 Gene3D - 115 290 - -
Gso8g2225 1198 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 503 706 IPR023299 GO:0000166
Gso8g2225 1198 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 58 1154 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gso8g2225 1198 Gene3D - 550 704 IPR023299 GO:0000166
Gso8g2225 1198 SFLD C1.7: P-type atpase like 411 920 - -
Gso8g2225 1198 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1198 - -
Gso8g2225 1198 Pfam Phospholipid-translocating ATPase N-terminal 55 110 IPR032631 -
Gso8g2225 1198 ProSitePatterns E1-E2 ATPases phosphorylation site. 429 435 IPR018303 -
Gso8g2225 1198 Pfam Phospholipid-translocating P-type ATPase C-terminal 897 1147 IPR032630 -
Gso8g2225 1198 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1147 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2225 Gso-Chr8 34984583 34992525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2225 1 1195 Primary Pumps ATPases AT1G68710 72.313 0.0 1853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2225 K01530 - gmx:100781421 2394.39