Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2223 ATGGATGAAAGTCTGAGGAAACATTTAACTGAACACATGAAAAAGGGAAGCATTTTGAGTGTCAAGGTGAAGAAGCATTTGAAAAATGGGAAAAATGTTTCTATGGGGTTTGGATTTGTTGAGTTTGACTCCCCTGAAACTGCTACAAATGTTTGTAAAGATTTACAGGGGCCAGTTTTGGACAGCCATGCTCTTATTTTACAACCTTGTAATGTCAAGAATGATGGGCAAAAACAAATGACAATTGAGAAGGATAGGAGTTTAACAAAATTGCTCATAAAAAAATGTTGCTTTTGA 297 0.3535 MDESLRKHLTEHMKKGSILSVKVKKHLKNGKNVSMGFGFVEFDSPETATNVCKDLQGPVLDSHALILQPCNVKNDGQKQMTIEKDRSLTKLLIKKCCF* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2223 98 Gene3D - 1 82 IPR012677 -
Gso8g2223 98 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14 65 IPR000504 GO:0003723
Gso8g2223 98 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 87 IPR000504 GO:0003723
Gso8g2223 98 SUPERFAMILY RNA-binding domain, RBD 7 79 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2223 Gso-Chr8 34824463 34824979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2223 2 83 Eukaryotic Initiation Factors Gene Family AT2G36660 31.707 6.23e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2223 K14787 - gsj:114423527 202.601