Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2220 ATGGCTCGCTCAGTGCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTTCTTCTGATAGCCACCGAGATGGGGCCAACAATGGTGGCAGAAGCAAGAACTTGTGAGTCTCAGAGCCATCGTTTCAAGGGGCCATGTTTAAGTGACACCAACTGTGGCTCTGTTTGCCGAACCGAAGGTTTCTCTGGAGGACACTGCCGTGGCTTCAGTCGCAGATGCTTCTGCACCAAAGAATGTAATAAAAATAATAATAATTAA 255 0.4627 MARSVPLVSTIFVLLLLLIATEMGPTMVAEARTCESQSHRFKGPCLSDTNCGSVCRTEGFSGGHCRGFSRRCFCTKECNKNNNN* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2220 84 Pfam Gamma-thionin family 32 78 - -
Gso8g2220 84 PANTHER DEFENSIN-LIKE PROTEIN 1 1 78 - -
Gso8g2220 84 SUPERFAMILY Scorpion toxin-like 32 78 IPR036574 -
Gso8g2220 84 PANTHER DEFENSIN-LIKE PROTEIN P322 1 78 - -
Gso8g2220 84 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Gso8g2220 84 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
Gso8g2220 84 CDD Knot1 43 75 IPR003614 GO:0006952
Gso8g2220 84 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Gso8g2220 84 SMART gth_4 33 78 IPR003614 GO:0006952
Gso8g2220 84 Gene3D - 32 78 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2220 Gso-Chr8 34563040 34563936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2220 1 78 Plant Defensins Gene Families AT2G02100 58.974 1.30e-30 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2220 - - gsj:114420878 167.933