LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso8g2207	ATGGATGGGGTCGCACGTGCGGGGGAGGAGCAGGCTCAGTCATCATCATCATCATCGGACTTGGCCTCGGGGTGGCGTCCCCGCGGCTTCGTGTTCTCTCCTTGCAAGCCTAAGGCCGAAGAAGAAGATGCTTCTGCTGCTGAGAAGAAGCCGCAGCAGCAACCGTTGCGCGTGGTTGTGAGGAAACCTTTGGTGGCTAGATTAACCAAGGAAATAGTTGAAACATACCAAATATGCAATCCACAGTTTAAATATTCTGAAGATCTAAATCCAAAAAGATTTTTGACCAGCCCATCTGTTGGAGTGCTTAATGATGGCTATGATAATGTAAACTCGGATCTTATTTTGACAGTGAATTTTGTGTTGATCCATTTAGAGAAAAATAAAAGATATATTGTCAAAGATCTCCTTGGCCACGGGACATTTGGACAAGTGGCTAAATGCTGGGATTCAGATACCAACAGTTTTGTTGCCGTGAAGATCATTAAAAATCAACCTGCATACTATCAACAGGCGCTGGTTGAAGTAACTATTTTAACAACGTTAAATAAGAAGTATGATCCCGAGGATAAGCATCACATTGTTCGTATATATGATTATTTTGTATATCAACGACATTTGTGCATTTGCTTTGAATTGCTGGACACAAACTTGTATGAGCTTATCAAGATGAATCATTTTAGGGGATTATCACTTGGTATTGTTCAGCTATTCTCTAAGCAGATTTTATACGGACTGGCTCTACTAAAAGAGGCTGGCATCATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTACGAGCACTGTGAAGCCAGCAGAAATAAAAATCATTGACTTTGGATCAGCATGCATGGAAAACCGCACCGTTTACTCTTATATTCAGAGTCGATACTATAGATCACCTGAGGTTCTTCTTGGATGTCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCAGAATTGTTTCTTGGATTACCATTATTCCCTGGGGCTTCAGAATTTGATCTTTTGAAACGGATGATTGAAATTCTTGGAGGACAACCACCTGATTATGTACTAAGGGATGCCAAAAACACAAGTAAATTCTTTAAGTGTATCGGGAGTCTCCAGAACATAGATAATAGTGAGAGTTCCAAAAATGCAAGAAGTGTTTATCAAGCATTGACAGTGGAGGAATATGAAGCTAGAGAATTGAAGAAGCCATCAATTGGAAAAGAGTATTTTAATCATATGAACCTTGAAGCAATTGTTACAAATTATCCCTACAGAAAAAACCTACCTAAAGAAGATATTCTCAAAGAAAGTCAAATACGACTGGCTCTTATTGATTTTTTGAAAGGACTTGTTGAATTCGATCCTGCAAAACGCTGGTCACCCTTTCAGGCTTCAAAACACCCTTTTGTAACTGGGGAACCTTTTACACACCCTTACAAGCCTCCTCCTGAGACTCCTCATATGCCAGTAGTTCAAAATATCAAGGTGGATAATCATCCAGGAGGAGGACACTGGTTTGCTGCTGGTCTATCACCTAATGTTCCAGGAAAAAGCAGAGCTTCCCTCTATAGCAGTCCACATTTTCAGATGGTTCAACATCCGCCTGCTAATAGTTATGGCAGTGTAGGAAGTCATGGGAGCTATAATGATAGTGTTGGGCTTGGAAGCAGCTATGGAAGTTATGGAGAGAGCAGTAACATGTTTGCTTACTATTCACCTATTGGTCCATCTGTTATGAACATGCACAATCAGGGAAGTATGTCAATGCTTGGGAATAGTCCAGATGCTAGGAGGAGAGTTAAGTACCAACCTGGGAATGGGCTGGGCATAAGTCCGGCAGCGGGAAATTTTGCTCCCCTGCCCCTTGGTGCCAGCCCATCTCAATTTACTCCACCAAGTTCCTATAGTCAGGTTTCAGTCGGTTCTCCAGGACACTACGGACCCACATCTCCTGCAAGAGGAACTTCTCATGGATCACCTTTAGGCAAGACAGCTGCAGCTAGCCAGTTTAATAGAAGAAAAAATTGGGGACATTCCGGAAGTCCTCAAACTCTAGAAGCATTTTCTTCACATTGGCAAGGTCAATATCTTGACAGCACAAGCCATACTGAGGGAACATCACAAGCTCTTGGCAGTTCACCATCATATCTACAGTCAAATAGTAATCCTGGAAACTGGAAGCAGCGAGGAAGTGGAGGATTATCTGCTAATCAGAACATTTCATCCTTGATGAAGCCCAGTGCTAGTATGAACTCACAATCAACAGAATTGGTTTATGACAATGCGGAGACAGGCATTTCTTTGCCTGATCCTGGTGATTGGGACCCTAATTATAGTGATGAATTACTTCTTCAAGAGGATGGTTCAGATGAAAGCAGTTTGACAACTGAGTTTGGCAGAAGTATGAATCTTGGTGCTACTGAAACATGGGCTGGATTTGGAAGGTTCAACCATGTTTCGAGCACAAACACTCCTCCAATAATCATGCAAAGACTGAATGGACCAAGTCAAGCATTCACTAATGTTGAGATGGGTAGCCTTCCAATGCATGATCTTCAAGCAACATATGTACCCTCTATGTCTAAGCATTTTCATCTCATGCCTCATATTTTACAAAATTCTCCAAGTCGTTTTGGATACCAATCTGTTCAAAGATTCACACATGGTAGACCCCCCCATGGTGCTGAGTGGAATCAAATTAAGATTCAGGCTCCTTCTTCTGGTTTTAGCAGTGTGGACCCTCGTTCTCCCCGGAATAACTCATTCACCAACAGTATGACATGGGGGCGAAGAATGAATCCTCCTGTCTCAAGCATGCCTCCAACATCCGGCACAAGAAAAGATTATGCAAGGATAGACTAG	2874	0.421	MDGVARAGEEQAQSSSSSSDLASGWRPRGFVFSPCKPKAEEEDASAAEKKPQQQPLRVVVRKPLVARLTKEIVETYQICNPQFKYSEDLNPKRFLTSPSVGVLNDGYDNVNSDLILTVNFVLIHLEKNKRYIVKDLLGHGTFGQVAKCWDSDTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLGIVQLFSKQILYGLALLKEAGIIHCDLKPENILLCTSTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGCQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLKRMIEILGGQPPDYVLRDAKNTSKFFKCIGSLQNIDNSESSKNARSVYQALTVEEYEARELKKPSIGKEYFNHMNLEAIVTNYPYRKNLPKEDILKESQIRLALIDFLKGLVEFDPAKRWSPFQASKHPFVTGEPFTHPYKPPPETPHMPVVQNIKVDNHPGGGHWFAAGLSPNVPGKSRASLYSSPHFQMVQHPPANSYGSVGSHGSYNDSVGLGSSYGSYGESSNMFAYYSPIGPSVMNMHNQGSMSMLGNSPDARRRVKYQPGNGLGISPAAGNFAPLPLGASPSQFTPPSSYSQVSVGSPGHYGPTSPARGTSHGSPLGKTAAASQFNRRKNWGHSGSPQTLEAFSSHWQGQYLDSTSHTEGTSQALGSSPSYLQSNSNPGNWKQRGSGGLSANQNISSLMKPSASMNSQSTELVYDNAETGISLPDPGDWDPNYSDELLLQEDGSDESSLTTEFGRSMNLGATETWAGFGRFNHVSSTNTPPIIMQRLNGPSQAFTNVEMGSLPMHDLQATYVPSMSKHFHLMPHILQNSPSRFGYQSVQRFTHGRPPHGAEWNQIKIQAPSSGFSSVDPRSPRNNSFTNSMTWGRRMNPPVSSMPPTSGTRKDYARID*	958

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso8g2207	957	CDD	PKc_YAK1	131	474	-	-
	Gso8g2207	957	MobiDBLite	consensus disorder prediction	589	611	-	-
	Gso8g2207	957	MobiDBLite	consensus disorder prediction	701	743	-	-
	Gso8g2207	957	SMART	serkin_6	131	474	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso8g2207	957	MobiDBLite	consensus disorder prediction	631	648	-	-
	Gso8g2207	957	Gene3D	Transferase(Phosphotransferase) domain 1	212	475	-	-
	Gso8g2207	957	MobiDBLite	consensus disorder prediction	1	53	-	-
	Gso8g2207	957	MobiDBLite	consensus disorder prediction	626	668	-	-
	Gso8g2207	957	SUPERFAMILY	Protein kinase-like (PK-like)	125	497	IPR011009	-
	Gso8g2207	957	MobiDBLite	consensus disorder prediction	910	948	-	-
	Gso8g2207	957	ProSitePatterns	Protein kinases ATP-binding region signature.	137	160	IPR017441	GO:0005524
	Gso8g2207	957	Pfam	Protein kinase domain	132	474	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso8g2207	957	Gene3D	Phosphorylase Kinase; domain 1	96	211	-	-
	Gso8g2207	957	MobiDBLite	consensus disorder prediction	9	23	-	-
	Gso8g2207	957	MobiDBLite	consensus disorder prediction	910	957	-	-
	Gso8g2207	957	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	254	266	IPR008271	GO:0004672\|GO:0006468
	Gso8g2207	957	PANTHER	DUAL SPECIFICITY PROTEIN KINASE	48	746	-	-
	Gso8g2207	957	ProSiteProfiles	Protein kinase domain profile.	131	474	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso8g2207	957	PANTHER	BNAC04G29850D PROTEIN	48	746	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso8g2207	Gso-Chr8	33518310	33551815	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso8g2207	130	360	MAP Kinase Gene Family	AT3G18040	33.740	2.29e-31	127

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_DYRK-YAK	Gso8g2207		Pkinase	1.1e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso8g2207	K18670		-	gmx:100786931	1921.75