Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2143 ATGACTCAGGCGGTGGAGGTCCTGAACCGGTATGGGACGGATCTGGTTGGGGAGCCGAGAGATTCTGATTCTGAGTGTTTGGCGGGTTTTGAGTGTTTTCTGAACATTGTGAGGGCATTGGGAATGGGATCGTGTATCTCAGAGGTTGGAGCTGGTGGTAATTCACCTCCTCTTCTTCCTTATTCGCCTGAATCCAACATGGATGGTGGAAAGAGAAGAAGGTTGAGGGGTTCCTCTTCGTTTGATTTCAAAGTGCCTGGGAGGATGTTCTTGAATGGTTCAAGCGAGGTTGCATCCATGTATTGCAAGCAAGGAAGAAAAGGGATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGTTCAAAGGAAGACACCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCACAGAGTTGCAAAGAAAGTTAGGGATTCTTTTCCTTTAAAGCTTAATGCCCAATGGGATTTGCATCATAAAAATAGAGACAGACTCAGTGATCATAGCAGTGCCACAGGAAGTTATAAATCTGAAGGGAATGGATTTAGACTGGTGGATGAGAAAACTAGTCCCATTGATCATGAACATGAAGAAACAGATACTATTTTGACATTACGAGAATCTTTTTTGAAGGCTTGTAAGATTATGGACAAAGAACTGAAACTTCATCCTGATATTGACTGCTTTTGTAGTGGGACTACAGCAGTTACCTTGGTCAAGCAAGGGCTGGACCTTGTTATTGGAAATCTTGGGGACTCGAGAGCTGTACTGGGTACCCGAGATCATGATGATTCTCTTATTGCTGTTCAGTTGACTGTTGACCTTAAGCCAAATCTTCCAAGGGAAGAAGAGAGGATCAGGCTTCGTAGAGGAAGGGTTTTTTCCCTTCAGAATGAACCTGAGGTGGCTCGAGTTTGGCTGCCTAACTCTGATTTCCCTGGTCTTGCTATGGCTCGGGCATTTGGAGATTTTTGCCTTAAGGACTTTGGATTGATTGCTGTTCCAGATATCTCATATCACCGTCTTACCGAGAAGGATGAATTTGTCGTGTTAGCAACAGATGGGATTTGGGATGTTTTATCAAATGAAGAAGTTGTGGACATTGTAGCACCTGCTCCACGGTCTAGTGCTGCTAGAGCACTGGTTGAGTCAGCTGTTCAGGCATGGAAGACAAAATTTCCTTTTTGTAAGGTTGATGATTGTGCTGCCGTATGCCTCTTCTTTGATTCTGATTCAGATTTCAAGTCAACAGATACCAAAGACAAGTTGATACCGGAGGCATCTATTGACCAATCTGAGAAGTTATCTTTACTTGGTGAAAAGGGAGTTGGAATGGAAGCTGAAAAACAGCAGCAATAG 1368 0.4349 MTQAVEVLNRYGTDLVGEPRDSDSECLAGFECFLNIVRALGMGSCISEVGAGGNSPPLLPYSPESNMDGGKRRRLRGSSSFDFKVPGRMFLNGSSEVASMYCKQGRKGINQDAMLVWENFCSKEDTIFCGVFDGHGPYGHRVAKKVRDSFPLKLNAQWDLHHKNRDRLSDHSSATGSYKSEGNGFRLVDEKTSPIDHEHEETDTILTLRESFLKACKIMDKELKLHPDIDCFCSGTTAVTLVKQGLDLVIGNLGDSRAVLGTRDHDDSLIAVQLTVDLKPNLPREEERIRLRRGRVFSLQNEPEVARVWLPNSDFPGLAMARAFGDFCLKDFGLIAVPDISYHRLTEKDEFVVLATDGIWDVLSNEEVVDIVAPAPRSSAARALVESAVQAWKTKFPFCKVDDCAAVCLFFDSDSDFKSTDTKDKLIPEASIDQSEKLSLLGEKGVGMEAEKQQQ* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2143 455 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 418 - -
Gso8g2143 455 CDD PP2Cc 97 411 IPR001932 -
Gso8g2143 455 Gene3D - 92 420 IPR036457 -
Gso8g2143 455 PANTHER ALPHABET, ISOFORM E-RELATED 42 418 - -
Gso8g2143 455 MobiDBLite consensus disorder prediction 165 184 - -
Gso8g2143 455 SMART PP2C_4 91 409 IPR001932 -
Gso8g2143 455 ProSiteProfiles PPM-type phosphatase domain profile. 97 411 IPR001932 -
Gso8g2143 455 Pfam Protein phosphatase 2C 171 375 IPR001932 -
Gso8g2143 455 SUPERFAMILY PP2C-like 94 412 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2143 Gso-Chr8 23584480 23589610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2143 70 415 PP2C-type Phosphatase Gene Family AT1G16220 58.543 1.08e-146 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2143 - - gmx:100802479 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2324 18 56128386 56133100 Gso8g2143 8 23584480 23589610 GST