Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2142 ATGGCAGATGGTGTTGTTGCCTTTCTGCTGCAGAACTTGTCACGGCTTCTTGAGGATGAACTAAAACTGTTTTCTGGCGTGGAGGACAAAATCAGTTCGCTGTGCAATGAGCTCAAGTTTATAGACATCTTCCTCAAGAGCTCTGAGGGGAAGTCCAACGACAAAGTTGTGAAAGAAGTGGTGAGCCAAATAAGAGATGTTGCCTACAAAGCTGAGGATGTGGTTGACACTTACATTGCCAACATCACCAAACACAGAACCAGAAACACACTGAGCATGTTATTCCACTTCAAAGAACGGTTCATGGTGCTGCACAAAGTCGACGCCGAGATAGAAAAAATCAAGATCTGTATTGATGAGATTTACAAGAACAAGGAGAGGTATGGCATCAGAGAAAGTGAATACAAAAGCGAAGAAGAAGAAGCTGAAACACTCCGCAAGAGAAGGAGAGATGTGGAGGAAGAAGATGTAGTGGGCTTAGTGCATGACTCAAGTGTGGTAATTAAGCAACTCACCATGGAAAGTGATTCATGTCGTAAAGTTGTTTCCATAATTGGAATGGGAGGGTTGGGTAAGACCACTCTTGCCAGAAAGATCTATAACAACAATCAGGTGAGTGAATTGTTTACTTGTCGTGCATGGGGTTATGTGTCCAATGATTATAGAGCTAGAGAGCTTTTGCTGAGCCTTCTCAAGTGTTTGCTGTCCACGGATGAATATAATGATTTGTTCAAGAAAAGAATGGATGGAGGAGGCGAAGATATAAGTGAGGAAGAATTGAAGAAGAAGGTAGCAGAATGGTTGAAGGGGAAAAAGTACCTGGTAGTGCTTGATGACATCTGGGAAACACAAGTATGGGATGAGGTTAAAGGCGCCTTTCCAGATGACCAAAGAGGTAGCAGAATACTAATAACAAGTCGCGACAAGGAGGTGGCATACTATATAGGAACAAAGTCTCCCTACTACCTTCCCTTCCTTAATAAAGGCGAAAGTTGGGAACTGTTCTCTAAGAAGGTGTTTCGAGGTGAAGAATGTCCTTCTAATCTACAGCCTCTGGGTAGATCCATTGTTGAAATTTGTGGAGGTTTACCACTTGCCATAGTTGTTTTGGCAGGACTTGTTGCCAGGAAGGAGAAATCAGAAAGAGAGTGGAAGAGAATCAAGGAAGTGAGTTGGCATCTTACACAAGAAAAGACTCAAGTGATGGATATACTGAAGCTGAGCTATGACAGCTTGCCTCAAAGATTAAAGCCATGCTTTCTGTATTTTGGAATCTATCCCGAAGACTATGAGATCAGTGCAAGGCAATTGATCCAACTATGGACAGCTGAAGGGTTCATACATCCACAAAAACCTGGAATCCTGAGTACAGCAGAGATAGAAGATGTTGGTGACTACTACTTGGATGAGCTGGTGGATCGCAGCCTGGTGCAAGTGGCGAGTAGGAGGAGTGATGGTGGTGTCAAGACATGTCGGATTCACGATCTTCTTCGTGACCTCTGCATATCAGAGAGCAAATCCAGTAAGTTTTTGGAGGTTTGCACGGAGGTAAACATTGATACTCTATCCTTGAGCAATCCTCGTAGATTGTCCTTGCAATGCAAAGCACGGCCTAATATCTGTACAAAAAAATTTAATCAATCATACACTCGTTCCTTGTTCTTCTTTTCTGAAATTATGCACACACGTGGCATTCCAAAGAGCATCAAGAATGCTCGTGTGCTGTATTCAAAATCCAAAGGAGCAATGAATTACTCACTGCATAGTACTTTTAAGACGATGATCCATCTAAGGTATTTGAGAATAGACACAGGTGTCAGCCACATTCCAGCTTCTATAGGCAACCTTAGGAATTTAGAAACGCTAGATGTAAGATACAAAGAGACTGTCTCCAGTGAAATTTGGAAGTTGAAGCAACTGAGGCATCTTTATTTGAGAGGGGGTGCAAAATTGCCAGAAGTAGCTAGAGAAAGAAAGGTGAATCTTCAAACTCTGTGGTTAAGGGCTTTTGATCGACAAATGGTGTCCATGATGAACAAGGACATGTATGTCAATGACATATTTCCCAGGTTGAGAAAATTAGTTTTGCACTATCCATTTCATCGTCCTTCTCACGAACAATTACCAACTGTAAGGTTACCAAGTCTACACCACCTATGCAATCTCCATAGCCTAAAAATAATTGACTTTCTAGAACTTCCACCTGACAAAAATGCCTTTCCATCACATCTCACCAAGATAACCTGGAAACAAATACATGTCGGCAGTGACTTCTCTTTGATGAGTACTTTAGGATGGCTAACCAACCTACAAATTTTGAAAATGGGAAGGCAATGCTCTGACGTGTTGTTCGACCTTAATGTTGGTGCAGGAGAGTTCCCACAGCTTCAAGTATTTCAGATGAGGGGAATGAAACTCAGAAGCTGGAGATTGGACAAAAGTGCAATGCCACATCTTCAACATCTGCTCATTGAAGGCTGTGAATACTTGAATGATCTTCCTGAAGAAGTATGGTCCTTGACTACCTTACGAAAAGTGCATGTTTTGTGGCCTTCTGAAAGATTGGCAAACAGACTTCAAAATGTGAAATTAAAGAATGGCTGTAAGCTCATAATCTCTAATGCTCCTCCAAATGGTCAATCAGATCAGAATGCACTGACACATTCTGTATCAGTTGATGCCTGA 2685 0.419 MADGVVAFLLQNLSRLLEDELKLFSGVEDKISSLCNELKFIDIFLKSSEGKSNDKVVKEVVSQIRDVAYKAEDVVDTYIANITKHRTRNTLSMLFHFKERFMVLHKVDAEIEKIKICIDEIYKNKERYGIRESEYKSEEEEAETLRKRRRDVEEEDVVGLVHDSSVVIKQLTMESDSCRKVVSIIGMGGLGKTTLARKIYNNNQVSELFTCRAWGYVSNDYRARELLLSLLKCLLSTDEYNDLFKKRMDGGGEDISEEELKKKVAEWLKGKKYLVVLDDIWETQVWDEVKGAFPDDQRGSRILITSRDKEVAYYIGTKSPYYLPFLNKGESWELFSKKVFRGEECPSNLQPLGRSIVEICGGLPLAIVVLAGLVARKEKSEREWKRIKEVSWHLTQEKTQVMDILKLSYDSLPQRLKPCFLYFGIYPEDYEISARQLIQLWTAEGFIHPQKPGILSTAEIEDVGDYYLDELVDRSLVQVASRRSDGGVKTCRIHDLLRDLCISESKSSKFLEVCTEVNIDTLSLSNPRRLSLQCKARPNICTKKFNQSYTRSLFFFSEIMHTRGIPKSIKNARVLYSKSKGAMNYSLHSTFKTMIHLRYLRIDTGVSHIPASIGNLRNLETLDVRYKETVSSEIWKLKQLRHLYLRGGAKLPEVARERKVNLQTLWLRAFDRQMVSMMNKDMYVNDIFPRLRKLVLHYPFHRPSHEQLPTVRLPSLHHLCNLHSLKIIDFLELPPDKNAFPSHLTKITWKQIHVGSDFSLMSTLGWLTNLQILKMGRQCSDVLFDLNVGAGEFPQLQVFQMRGMKLRSWRLDKSAMPHLQHLLIEGCEYLNDLPEEVWSLTTLRKVHVLWPSERLANRLQNVKLKNGCKLIISNAPPNGQSDQNALTHSVSVDA* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2142 894 Gene3D - 414 503 IPR036388 -
Gso8g2142 894 Gene3D - 132 319 IPR027417 -
Gso8g2142 894 PRINTS Disease resistance protein signature 181 196 - -
Gso8g2142 894 PRINTS Disease resistance protein signature 267 281 - -
Gso8g2142 894 PRINTS Disease resistance protein signature 360 374 - -
Gso8g2142 894 PRINTS Disease resistance protein signature 614 630 - -
Gso8g2142 894 Gene3D - 5 121 - -
Gso8g2142 894 SUPERFAMILY L domain-like 483 847 - -
Gso8g2142 894 CDD RX-CC_like 2 121 IPR038005 -
Gso8g2142 894 Pfam NB-ARC domain 167 410 IPR002182 GO:0043531
Gso8g2142 894 Coils Coil 135 155 - -
Gso8g2142 894 Gene3D Ribonuclease Inhibitor 557 865 IPR032675 -
Gso8g2142 894 PANTHER DISEASE RESISTANCE PROTEIN RP 39 872 IPR044974 GO:0006952
Gso8g2142 894 Gene3D - 325 413 IPR042197 -
Gso8g2142 894 Pfam Rx N-terminal domain 5 89 IPR041118 -
Gso8g2142 894 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 423 IPR027417 -
Gso8g2142 894 PANTHER - 39 872 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2142 Gso-Chr8 23578460 23583574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2142 180 500 WRKY Transcription Factor Family AT5G45050 27.160 7.26e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2142 - - gmx:100801950 1761.5