Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2133 ATGTGTTCTCTACTTTGGAGTTCCATTGCATTGTGTGTAGCTTTCCTACTCCTTGAGCTTGGCGTTGTGCACCCTTCACCCTCACACCATAGGATCACTCGCTTGCCGGGTCAACCCCATGTTCAGTTTCATCAGTTTTCAGGTTATGTAACCGTTGATGACAAAAACCAGCGTGCACTTTTTTTCTACTTTGCTGAAGCCGAAAAAGATGCACTTTCCAAGCCCCTTGTTCTGTGGCTCAATGGAGGGCCTGGTTGTTCTTCTCTTGGAGTTGGTGCATTTTCAGAGAATGGACCATTTAGGCCCAAAGGTAAGGGCTTGGTTAGAAACCAATTCAGCTGGAACAGAGCCAGGGATAACTTGGTGTTCTTGCAAAGCTGGTTTATAAAGTTCCCAGAATACAGAAACCGAAGTTTGTTCATTGTAGGAGAAAGCTATGCAGGTCATTATGTTCCTCAGCTGGCTGAACTTATGCTCCAATTCAACAAAAAGGAGAAGTTATTCAATTTAAAAGGCATTGCTCTTGGTAATCCAGTTCTAGAATTTGCAACAGATTTCAATTCGAGAGCTGAGTTCTTCTGGTCACATGGATTAATTTCAGATACAACGTACAAAATGTTCACTTCTGTTTGTAACTATTCAACATATGTGAGGGAATACTATAATGGTGCTGTTTCTCCTATCTGTTCAAGTGTTATGAGCCAAGTTACTACGGAAACAAGTAGATTTGTTGACAAATATGATGTGACCCTTGATGTTTGTTTATCTTCAGTGTTCTCACAAACCAAAGTCCTCAATCCCCAGCAAGTAACTGAAACCATAGATGTATGTGTGGAAGATGAAACAGTCAATTATCTGAACAGGAAAGATGTGCAGTCAGCTATGCATGCACATCTTGTTGGAGTTCAAAGATGGTCTGCTTGCAGCAATGTCCTGGATTATGAGCTGCGTGACTTGGAGATACCAACAATCACGGTTGTGGGGAAGCTAGTCAAGGAGGGAATACCAGTATTGGTTTACAGTGGTGATCAGGATTCAGTTATCCCACTGACTGGAAGTAGAACACTAGTACATAAATTGGCAAAAGAACTTGGATTGAACACCACTGTGCCATACAGGGTGTGGTTTGAGAAGCAGCAGGTGGGTGGGTGGACTCAAGTTTATGGTAACATCCTTTCATTTGCCACCATCAGAGGAGCATCACATGAAGCTCCATTTTCACAGCCTGAGAGATCACTTGTGCTGTTCAAGTCCTTCTTAGAAGGAGGACCACTACCACAAGAGTTTTGA 1290 0.4264 MCSLLWSSIALCVAFLLLELGVVHPSPSHHRITRLPGQPHVQFHQFSGYVTVDDKNQRALFFYFAEAEKDALSKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGKGLVRNQFSWNRARDNLVFLQSWFIKFPEYRNRSLFIVGESYAGHYVPQLAELMLQFNKKEKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDTTYKMFTSVCNYSTYVREYYNGAVSPICSSVMSQVTTETSRFVDKYDVTLDVCLSSVFSQTKVLNPQQVTETIDVCVEDETVNYLNRKDVQSAMHAHLVGVQRWSACSNVLDYELRDLEIPTITVVGKLVKEGIPVLVYSGDQDSVIPLTGSRTLVHKLAKELGLNTTVPYRVWFEKQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKSFLEGGPLPQEF* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2133 429 Gene3D alpha/beta hydrolase 27 117 IPR029058 -
Gso8g2133 429 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 116 IPR001563 GO:0004185|GO:0006508
Gso8g2133 429 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 117 427 IPR001563 GO:0004185|GO:0006508
Gso8g2133 429 ProSitePatterns Serine carboxypeptidases, histidine active site. 392 409 IPR033124 GO:0004185
Gso8g2133 429 PANTHER CARBOXYPEPTIDASE 6 116 - -
Gso8g2133 429 PANTHER CARBOXYPEPTIDASE 117 427 - -
Gso8g2133 429 SUPERFAMILY alpha/beta-Hydrolases 32 425 IPR029058 -
Gso8g2133 429 Pfam Serine carboxypeptidase 117 422 IPR001563 GO:0004185|GO:0006508
Gso8g2133 429 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Gso8g2133 429 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 152 IPR001563 GO:0004185|GO:0006508
Gso8g2133 429 PRINTS Carboxypeptidase C serine protease (S10) family signature 392 405 IPR001563 GO:0004185|GO:0006508
Gso8g2133 429 ProSitePatterns Serine carboxypeptidases, serine active site. 141 148 IPR018202 GO:0004185
Gso8g2133 429 Gene3D alpha/beta hydrolase 118 425 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2133 Gso-Chr8 23356953 23360583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2133 285 425 Calmodulin-binding Proteins AT2G22960 26.241 1.75e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2133 K16297 - gmx:100805130 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2315 18 56024990 56028746 Gso8g2133 8 23356953 23360583 GST