Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2130 ATGGCTCTGGACCAGCTTTCGAATCCCAACGCCGTTGACGGTGCCGGTAACGGCGCGACGCCGTGCTCCGCTGTGGACGGCGGCATCGAGGACGGGAGGCCGGCTGCGAGGCTGCCGCGGTGGACGCGACAGGAGATTCTGGTGCTGATTCAGGGAAAGAGCGATGCGGAGAGCCGGTTCAGACCGGGCCGTGGGAGCGGTTCGGCGTTTGGTTCGAGCGAACCGAAATGGGCGTTGGTGTCCTCGTACTGCAAGAAGCACGGCGTGAACCGGGAACCGGTTCAGTGCCGGAAGCGATGGAGCAACCTCGCCGGCGATTACAAGAAGATCAAGGAGTGGGAGTCGCAGGTGAGGGACGAAACGGAGTCGTTTTGGCTCATGAGGAACGATTTGAGGAGGGAGAGGAAATTGCCTGGGTATTTTGACAGGGAAGTTTACAATATTCTCGATTCGCCGTCGTCAACGGCTGCGGCTGCAGCTGCGGCTGCGGCGGCGGAGACTCCGGTGCCGGTGGCGACGGTTGAGGAGGAGGTGCACCTCTATGATAGTAATCGGAGGGTGGGGAGTGAGGATGGGTTATTCTCGGATTCTGAGAAGGACGAGGTTTTGCTTTTAGCTACTACCAAGGATGTTCCTGCACCTGTTCCTATCTCAGAGAAGCAATATCAGCCCCATCTCCAAGGCTGCGAAGGGGAAGGCAACCCTCAAGGTACTACCAATGAGAAACAGGCAAACCCAAATCCAGAAATGGGTTCTACATCTCAAGGGGAACGGAAGAGGAAGTGGTTAGCAACCGATGGAGAGGAGGAAACTTTGCAAAGCCAATTAATTGATGTCTTAGAAAAGAATGGCAAAATGCTACGTGATCAACTTGAAGCTCAGAAACTGAATTTCCAGTTGGATCGTCAACAGCAGAAAGACACTGCAAGTAACATAGTTGCTGTACTAGATAAGCTTGCAGATGCTCTAGGGAGAATTGCTGATAAATTGTAG 993 0.5418 MALDQLSNPNAVDGAGNGATPCSAVDGGIEDGRPAARLPRWTRQEILVLIQGKSDAESRFRPGRGSGSAFGSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESQVRDETESFWLMRNDLRRERKLPGYFDREVYNILDSPSSTAAAAAAAAAAETPVPVATVEEEVHLYDSNRRVGSEDGLFSDSEKDEVLLLATTKDVPAPVPISEKQYQPHLQGCEGEGNPQGTTNEKQANPNPEMGSTSQGERKRKWLATDGEEETLQSQLIDVLEKNGKMLRDQLEAQKLNFQLDRQQQKDTASNIVAVLDKLADALGRIADKL* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2130 330 CDD GT1 39 111 - -
Gso8g2130 330 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 330 - -
Gso8g2130 330 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 1 330 - -
Gso8g2130 330 Pfam Myb/SANT-like DNA-binding domain 40 127 IPR044822 -
Gso8g2130 330 MobiDBLite consensus disorder prediction 1 36 - -
Gso8g2130 330 Coils Coil 277 308 - -
Gso8g2130 330 MobiDBLite consensus disorder prediction 232 253 - -
Gso8g2130 330 ProSiteProfiles Myb-like domain profile. 33 104 IPR001005 -
Gso8g2130 330 MobiDBLite consensus disorder prediction 221 260 - -
Gso8g2130 330 Gene3D - 41 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2130 Gso-Chr8 23328839 23332733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2130 40 112 Trihelix Transcription Factor Family AT1G33240 34.247 5.25e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso8g2130 Myb_DNA-bind_4 2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2130 - - gmx:100804601 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2312 18 56000121 56004279 Gso8g2130 8 23328839 23332733 GST