Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2119 ATGTTCCCTTCCACTAATTACACCTCCTCAGGCTCTTACCCTCGTTTCCCTTCTTCATCGTCTTCTTCCACTTCACCCTACCCTTCTTTTACTCTCCTTCATCCTGAAAATTCTTCTTCCAGCAACACCTTTCTTTGCGATCCACTTGCTCTTACCTACATACCCTCTCATTACCATGCTCCAATAATCCCAGAAACACTAGCCAATTGGGCTGTTGCAGATTGTGCAATACTGAATCAGGATTTCGGTGGTGCCCTTTATGGCATCACCAATAAACCAGAGAAGAAAGCAACCAAAAAAGATAGGCACAGCAAGATTCACACATCTCAGGGTTTGAGGGACAGAAGGGTGAGGTTGTCCATTGAGATCGCACGCAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGACAAAGCCAGCAACACCCTTGACTGGCTCTTCACAAAGTCCAAGAAGGCAATCAAGGAGCTTACTCGAAGCAAGCACAGTGCTGATAGCTTCGAATTCTCCTCATCTTCGGATGGTGAAGTGGTTTCTACCATCCACCAAGACCTACACCAACAACAAGGGGTAGATTTGGAAGAGGGAAAGTTGAAAGAACCTGCAGCTTATTGTGTTAAAGCAAAGATGAAGGAATCTAGGGAAAAAGCAAGGGCAAGAGCAAGGCAAAGGACTAGTAGCAAGGTATTGTGCAACATAAGTGGCGAAGGGAAGGTGCAAGACTTGAAGAAAAAATGCCCTGCAACTGAAAACCCTCAAATCCTGAACCAATTAAGGTCACCCCTTCAGCCTCCTCATCCTCAAGATGTGGGTGGAGAAGTGCCAAGAGATGATGACTTCAATGTTATTGAGGAATCCATTGTCATCAGAAGAAAGTTGAAACACACTTTGATGTCTTCCATTCATCACCAAAACGCTGTGATCCCTAAGGAAGCAAGTGTAAACAACAGTGACTACCACTCCTTCCCCAATCTGTCTCCAAATTGGGAAGCTAATAATAATGGTGCTAATGGACGCTCCACCTTTTGTGCAATAGCCAGCATGAATCTATCTACAGGGCTTCAAATTTTTGGAAAATCTTGGGAGGAGTGCACCAATCCTCATCCAAGCTAA 1113 0.4456 MFPSTNYTSSGSYPRFPSSSSSSTSPYPSFTLLHPENSSSSNTFLCDPLALTYIPSHYHAPIIPETLANWAVADCAILNQDFGGALYGITNKPEKKATKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELTRSKHSADSFEFSSSSDGEVVSTIHQDLHQQQGVDLEEGKLKEPAAYCVKAKMKESREKARARARQRTSSKVLCNISGEGKVQDLKKKCPATENPQILNQLRSPLQPPHPQDVGGEVPRDDDFNVIEESIVIRRKLKHTLMSSIHHQNAVIPKEASVNNSDYHSFPNLSPNWEANNNGANGRSTFCAIASMNLSTGLQIFGKSWEECTNPHPS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2119 370 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 369 IPR005333 GO:0003700
Gso8g2119 370 ProSiteProfiles TCP domain profile. 99 157 IPR017887 -
Gso8g2119 370 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 8 369 - -
Gso8g2119 370 MobiDBLite consensus disorder prediction 1 22 - -
Gso8g2119 370 MobiDBLite consensus disorder prediction 257 277 - -
Gso8g2119 370 Pfam TCP family transcription factor 98 228 IPR017887 -
Gso8g2119 370 ProSiteProfiles R domain profile. 211 228 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2119 Gso-Chr8 23093690 23095565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2119 55 332 TCP Transcription Factor Family AT1G67260 32.881 7.42e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso8g2119 TCP 1.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2119 - - gsj:114424268 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2298 18 55871810 55873772 Gso8g2119 8 23093690 23095565 GST