Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2106 ATGACACGCATGAAGTTGGACTACGACGCCACCACCACACCGATGGCCTGGGATTCCGTCAAAGGAGGGCTTTCGTTGAGGGAGAGGACAAGGGCTAGAGAGGAATACTCTTTTAGTATACTTGAGGGGTTATTTTTCTTCTGCAAAGAAGATGATAGTGTTACAATTGCTAATAGAGGACCTTTCATGCAAAGCTTTCCTACTGGGAACCCCAGTTATCATGGAAGACACACAATAGTAATTGCTCCTCAGACTGTAAATTTTCAACCTAATGTTGCCCCTTCCGTCATAGTAGATGAATTTAAGTCTTTGACAGATTATTTTGGCTCAAAATATTTCATTGGTGAGGGTGCATATGGGAAAGTATATCAAGAAGTAGTAATCAAAAAGTTAGATTCCAGTAATCAGACAGAACAAGAATTTCTTTCTCAGGTTTGGTTCAATTGCTATTTCTCCATCGTATCAAGGCTAAAGCATGAAAACGTTGTTGAGCTTGTTAACTATTATGTGGATGGTTCTTTCCGCGCTCTTGCCTATGAGTATGCTCCTAAAGGATCCCTTCACAATATTCTATATGGTTAG 582 0.4021 MTRMKLDYDATTTPMAWDSVKGGLSLRERTRAREEYSFSILEGLFFFCKEDDSVTIANRGPFMQSFPTGNPSYHGRHTIVIAPQTVNFQPNVAPSVIVDEFKSLTDYFGSKYFIGEGAYGKVYQEVVIKKLDSSNQTEQEFLSQVWFNCYFSIVSRLKHENVVELVNYYVDGSFRALAYEYAPKGSLHNILYG* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2106 193 PANTHER PTO-INTERACTING PROTEIN 1 45 193 - -
Gso8g2106 193 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 45 193 - -
Gso8g2106 193 Gene3D Phosphorylase Kinase; domain 1 76 181 - -
Gso8g2106 193 ProSiteProfiles Protein kinase domain profile. 108 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2106 193 SUPERFAMILY Protein kinase-like (PK-like) 89 192 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2106 Gso-Chr8 22906169 22907943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2106 99 193 Receptor kinase-like Gene Family AT4G02010 40.000 1.29e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Gso8g2106 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2106 K13436 - gmx:106799558 303.523