Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2104 ATGGCCACTCGTGTTATCCCACCAAGAATCCTAAGGAAGCTTCGCTACAACACCGCCACAAAACCCCTCAACTCCTCTCACCCTCCTCTCTCCCCGTCTCTCTCTCCTTCTCCCTGCCTCCTACCTGCTCCGCTGCCGTCCCCCGCCGTGCTCCGTCCCTCCGCCGCCGCCTCCGACGACCTCAGCTTCCGCGACGTCGAAAAGCTCTTCTCCTCTGTCTCCACCACCAGCCTCCTCCGCTCCTCCGCCGTGCTGCACGCCACCGCCGTCGAGCCCATGGTTGACTTCGGCACATGGCTCTTGCGATCAAATCTCATGCACGTGCATGGCATCCGCGACCTCATCCTCGCCACCGTCCGCAACACCTTCTTCGACCACTTTTGCGCCGGCGAGGACGCCATCACCACCGCTGCCAGCATCCGCCACCTAAACCGTGCCGGCCTCCGCGGCATGCTCGTCTACGGCGTCGAAGACGCAAACGACAACGACGCCTGCCACCGCAACTTCAAGGGCTTTCTTCACACCATCGACGTCAGCAGATCGCTTCCCCCTTCTTCGGTGAGCTTTGTGATAGTGAAAATCACCGCAATATGTCCTATGAGCCTGTTGGAACGAATGAGTGACCTTCTTAGATGGCAACACAAGGACCCTTGTTTCAGTTTGCCATGGAAGCAAGATTGCTTCCCCATATTCTCCGAGTCAAGCCCTTTGTACCACACAAGCAACAAACCCGAGCCTCTTACCCCAGAGGAAGAAAAAGACCTTCAACTTGCCATCCAGAGATTCCATGAGCTTTGCCATAAGTGTGTGCAAGTCAACATTCCTTTGTTGGTTGATGCAGAACACACTTCTGTTCAACCTGCTATTGACTACTTCACATACTCCTCTGCCATCTTGCACAACAAAGGTGACAACCCCATTGTGTTTGGGACCATGCAGACCTACCTCAAGGATGCCAAGGAGAGACTCTTGCTGGCTGCAGAGGCTGCAGACAACATGGGAATCCCAATGGGCTTCAAACTTGTCAGGGGTGCTTATATGTCAAGTGAAACAAAATTGGCTGAGTCTTTGGGCTATTCTTCCCCAATTCACGACACCATCGAGGACACACACAAGTGCTTCAATGACTGCTCCTCTTTCATGCTTGAGAAGGTTGCTAATGGCCCTGGTGGACTTGTTCTTGCAACTCATAATGTTGAGTCAGGGAAACTGGCTGCTGCAAAAGCACATGAGCTAGGGATTGGAAAGGTGAACCACAAGCTTGAATTTGCACAGCTGCATGGAATGTCAGAGGCACTTTCCTTTGGTTTGAGCAATGCAGGATTTCAGGTGAGCAAGTATATGCCATTTGGACCAGTGGAGACTGTTATGCCATATCTCCTAAGAAGGGCTGAAGAGAATAGAGGAATGTTGGCTGCTTCGGGCTTTGACAGGCAACTGATGAGGAAGGAGTTGGGAAGGAGACTAAAAGCTGCTGTCTTTTAA 1485 0.5273 MATRVIPPRILRKLRYNTATKPLNSSHPPLSPSLSPSPCLLPAPLPSPAVLRPSAAASDDLSFRDVEKLFSSVSTTSLLRSSAVLHATAVEPMVDFGTWLLRSNLMHVHGIRDLILATVRNTFFDHFCAGEDAITTAASIRHLNRAGLRGMLVYGVEDANDNDACHRNFKGFLHTIDVSRSLPPSSVSFVIVKITAICPMSLLERMSDLLRWQHKDPCFSLPWKQDCFPIFSESSPLYHTSNKPEPLTPEEEKDLQLAIQRFHELCHKCVQVNIPLLVDAEHTSVQPAIDYFTYSSAILHNKGDNPIVFGTMQTYLKDAKERLLLAAEAADNMGIPMGFKLVRGAYMSSETKLAESLGYSSPIHDTIEDTHKCFNDCSSFMLEKVANGPGGLVLATHNVESGKLAAAKAHELGIGKVNHKLEFAQLHGMSEALSFGLSNAGFQVSKYMPFGPVETVMPYLLRRAEENRGMLAASGFDRQLMRKELGRRLKAAVF* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2104 494 SUPERFAMILY FAD-linked oxidoreductase 130 491 IPR029041 -
Gso8g2104 494 Pfam Proline dehydrogenase 139 470 IPR002872 -
Gso8g2104 494 PANTHER PROLINE DEHYDROGENASE 1 492 - -
Gso8g2104 494 Gene3D - 101 491 - -
Gso8g2104 494 PANTHER PROLINE OXIDASE 1 492 IPR015659 GO:0004657|GO:0006562
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2104 Gso-Chr8 22883584 22885579 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2104 K00318 - gmx:100798942 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2284 18 55720896 55724088 Gso8g2104 8 22883584 22885579 GST
Gso13g0319 13 14563305 14567039 Gso8g2104 8 22883584 22885579 PCT
Gso19g1039 19 38072988 38075425 Gso8g2104 8 22883584 22885579 PCT
Gso8g2104 8 22883584 22885579 Gso13g0319 13 14563305 14567039 PCT
Gso8g2104 8 22883584 22885579 Gso19g1039 19 38072988 38075425 PCT