Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2094 ATGCAGGCCAGGGAGATCACAGGACTCAATTATTTACTCCCTCCAGACCCTTGTTTCAACTACAGCATGGTTCAGAACACCATCCCCACATTTCAACTCCACAAACTCTCAAACCAATTCTATGGTTTGCAGAAACCTCCTCCTCAAGTGCTTGCAGACTTCAGCCCCCCTCAGTCCTCATGCATCAGCAGCAACTCAACCTCTGATGAAGCAGATGAGCAGCAGCAAAGCCTCATCAATGAGAGGAAGCACAGGAGGATGATATCGAACCGCGAATCGGCACGCCGGTCACGCATGAGGAAGCAGAAGCACCTTGATGAGCTGTGGTCACAGGTGGTTTGGCTCAGGAATGAAAATCACCAGCTCATGGACAAGCTGAACCATGTGTCTGAGTCACATGATAAAGTTGCTCAAGAGAATGTTCAGCTGAGAGAAGAAGCCTCAGAACTTCGCCAAATGATATGTGACATGCAGCTACACAGTCCATACCACCCTCCTCCCTTGAGTCCCATTGATGATGATGTTTCTCCCTATGTCAAATCTGATTCCTCAATCACAGACTCTTTGGACCTGCTTGGTTGA 582 0.4845 MQAREITGLNYLLPPDPCFNYSMVQNTIPTFQLHKLSNQFYGLQKPPPQVLADFSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDKVAQENVQLREEASELRQMICDMQLHSPYHPPPLSPIDDDVSPYVKSDSSITDSLDLLG* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2094 193 MobiDBLite consensus disorder prediction 47 78 - -
Gso8g2094 193 MobiDBLite consensus disorder prediction 161 193 - -
Gso8g2094 193 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Gso8g2094 193 MobiDBLite consensus disorder prediction 54 74 - -
Gso8g2094 193 PANTHER BZIP TRANSCRIPTION FACTOR 1 193 - -
Gso8g2094 193 Gene3D - 80 135 - -
Gso8g2094 193 MobiDBLite consensus disorder prediction 179 193 - -
Gso8g2094 193 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
Gso8g2094 193 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 193 IPR044521 -
Gso8g2094 193 CDD bZIP_plant_GBF1 83 134 IPR045314 GO:0003700|GO:0006355
Gso8g2094 193 Pfam bZIP transcription factor 82 139 IPR004827 GO:0003700|GO:0006355
Gso8g2094 193 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Gso8g2094 193 SUPERFAMILY Leucine zipper domain 82 132 IPR046347 GO:0003700|GO:0006355
Gso8g2094 193 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2094 Gso-Chr8 22596510 22597415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2094 40 177 bZIP Transcription Factor Family AT3G30530 63.830 1.45e-52 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso8g2094 bZIP_1 4.7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2094 - - gmx:100500497 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2273 18 55617526 55618480 Gso8g2094 8 22596510 22597415 GST
Gso13g0331 13 14704089 14705071 Gso8g2094 8 22596510 22597415 PCT
Gso19g0334 19 5382727 5383760 Gso8g2094 8 22596510 22597415 PCT
Gso8g2094 8 22596510 22597415 Gso13g0331 13 14704089 14705071 PCT
Gso8g2094 8 22596510 22597415 Gso19g0334 19 5382727 5383760 PCT