Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2092 ATGACGATTGGTAGTCTAGCACCTAAGGCAGAGAAGAAGAAATCAAGGAAGAACAAGACTGTTGTTGTTAATGAGAATGCACCCTTGTTGCCAAAAAGTCATGTTCAGGAGAGTGATGCTGGTTTTGATGATTTCAATGGAGCTTCATTTTCTGGGGCTGTTTTTAACTTATCCACCACAATTATTGGTGCTGGTATCATGGCCTTGCCTGCAACCTTGAAACAGTTGGGGATGATACCTGGTCTTCTTGCCATCATCATCATGGCTTTGTTGACAGAGAAGTCAATTGAGCTTTTGATTCGGTTTACCCGGGCTGGGAAGTCTGCTTCTTATGCTGGTCTCATGGGGGATTCCTTTGGGAATTATGGAAAAGCTCTGGTGCAGATATGTGTTATAATCAATAACATCGGTGTTCTGATTGTTTACATGATTATAATTGGTGATGTGCTCTCTGGAACATCTTCAAGTGGAGATCATCACTATGGTATCCTTGAAGGATGGTTTGGTGTGCAATGGTGGACAGGCCGGACATTTGTTGTACTTTTTACAACACTTGCCATATTTGTACCTCTTGCGAGCTTTAAGCGAATTGATTCATTGAGATTCACGTCCGCCCTTTCAGTCGCACTTGCAGTTGTTTTTCTAGTCATTGCCGTGGGAATTGCTGTTGTCAAGATATTTAGTGGAGGCATTGTGATGCCCAGACTCTTCCCTGTCACGACTGATGTGGCATCATTCTTCAGACTATTCACTGTAGTTCCTGTGTTTGTGACTGCGTATATCTGCCACTACAATGTTCACAGCATAGACAATGAACTTGAGGACTCCTCACAGATGCAAGGGGTTGTACAAACCGCCCTTGTTCTATGCTCTTCAGTGTATGTAATGATAAGCTTCTTTGGGTTCCTCCTATTTGGCGAAGGAACTCTTGATGATGTACTGGCCAATTTCGATACCGATCTTGGAATTCCTTTCGGTTCTGTGCTCAATGATGCTGTTCGTATAAGCTATGCTGCGCACCTGATGCTTGTATTTCCAGTTGTCTTCTTTCCGTTGCGTCTCAACATAGATGGTCTCCTCTTCTCAAAATCAAGGCCTCTGGTTCTGGATAACGTCAGATTTGCATCACTCACTGTTGCCCTTATTGGTGTTATCTTCCTGGGAGCAAATTTCATACCTAGCATTTGGGATGCCTTCCAGTTTACTGGAGCAACTGCCGCAGTCTGTATAGGATTCATTTTTCCAGCTGCCATCACTCTTAAGGACCGCTACAACATTGCTACTAAATCAGACAAGACTTTGTCTGTCATTATGATAGTCCTTGCAGTCTTCTCAAACGTTGTGGCTATATACAGTGATGCATATGCCTTGATCAAGCAGAACAAAACTTCACGCGAATGA 1401 0.4325 MTIGSLAPKAEKKKSRKNKTVVVNENAPLLPKSHVQESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMIPGLLAIIIMALLTEKSIELLIRFTRAGKSASYAGLMGDSFGNYGKALVQICVIINNIGVLIVYMIIIGDVLSGTSSSGDHHYGILEGWFGVQWWTGRTFVVLFTTLAIFVPLASFKRIDSLRFTSALSVALAVVFLVIAVGIAVVKIFSGGIVMPRLFPVTTDVASFFRLFTVVPVFVTAYICHYNVHSIDNELEDSSQMQGVVQTALVLCSSVYVMISFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRISYAAHLMLVFPVVFFPLRLNIDGLLFSKSRPLVLDNVRFASLTVALIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLKDRYNIATKSDKTLSVIMIVLAVFSNVVAIYSDAYALIKQNKTSRE* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2092 466 PANTHER AMINO ACID TRANSPORTER 10 464 - -
Gso8g2092 466 Pfam Transmembrane amino acid transporter protein 48 452 IPR013057 -
Gso8g2092 466 PANTHER AMINO ACID TRANSPORTER AVT6A 10 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2092 Gso-Chr8 22540469 22544258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2092 3 466 Amino Acid or Auxin Permease AAAP Family AT3G30390 67.742 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2092 K14207 - gmx:100795222 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2270 18 55576992 55580702 Gso8g2092 8 22540469 22544258 GST
Gso19g0331 19 5301808 5306674 Gso8g2092 8 22540469 22544258 PCT
Gso8g2092 8 22540469 22544258 Gso19g0331 19 5301808 5306674 PCT