Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2073 ATGGCCGTAATAACTCCCAGGAAGATCTACCAACATCCTTTCCCAAAGTGGTATGACCCTGATGCAACTTGCGCGTACCATGGGAAAACCCTGGGCCACTCCACCGAAAAATGTCTGGCCCTTAAATACAAGGTTCAACATTTGATAGATGCCGGATGGATGACGTTTCAAGAGGATCGGCCCAACGTGAAAACAAACTCGCTCACCAATCATAGAGGGGGAGCAATTAATGCCGTAGAGTCGGATAGGCCGCGCAGGTCTAAGCCTTTAAAGGATCCAGAGAATCTTCTTCTGGACTTAAATGGTGTTCTGAAAGTTACAGATTTTGGATTGAGTACATATGCACAACAGGAGGATGAACTTCTTCGAACTGCTTGTGGAATTCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTACATCTGATATCTGGTTATGTGGAGTCATCCTCTTTGTGCTTATGGCCGGGTATTTGCCCTTTGTTGAGCCAAATCATGCGAAACTGTACAAAAAAATTGGCAGGGCCCAATTTACATGTCCATCATGGTTTTCTCCTAAGGCAAAGAAACTATTGAAGCTTATTCTTGATCCAAACCCTCTAACAAGGATAAAAGTTCCTGAACTTTTAAAAGATGAATGGTTCAAAAAAGGATACAAACAAACAACTTTTATAATGGAAGAGGATATCAATGTAGATGATGTTGCTGCTGCTTTCAATGATTCTAAGAAAGATTCTATAGAAGCTGAAAATCTTGTGACGGAGAGAAAAGAGAAACCAGTGTCAATGAATGCTTTTGAGCACATATCTAGGTCACAAAGCTTCAACCTTGAAAATTTGTTTGAGAAGCAGCAAGGGTCTGTTAAGAGAGAAACACATTTTACCTCACAGCGCCCTACAAATGAAATCATGTCAAAAATTGAGGAAGTTGCCAAGCCTCTGGGATTTAATGTTCACAAGCGAAATTATAAGGGATCAAATCGGTTGATGCATAACAATGTCAAGGACTAA 1026 0.4074 MAVITPRKIYQHPFPKWYDPDATCAYHGKTLGHSTEKCLALKYKVQHLIDAGWMTFQEDRPNVKTNSLTNHRGGAINAVESDRPRRSKPLKDPENLLLDLNGVLKVTDFGLSTYAQQEDELLRTACGIPNYVAPEVLNDRGYVGSTSDIWLCGVILFVLMAGYLPFVEPNHAKLYKKIGRAQFTCPSWFSPKAKKLLKLILDPNPLTRIKVPELLKDEWFKKGYKQTTFIMEEDINVDDVAAAFNDSKKDSIEAENLVTERKEKPVSMNAFEHISRSQSFNLENLFEKQQGSVKRETHFTSQRPTNEIMSKIEEVAKPLGFNVHKRNYKGSNRLMHNNVKD* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2073 341 Gene3D Transferase(Phosphotransferase) domain 1 91 248 - -
Gso8g2073 341 ProSiteProfiles NAF domain profile. 263 287 IPR018451 GO:0007165
Gso8g2073 341 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 76 329 - -
Gso8g2073 341 ProSiteProfiles Protein kinase domain profile. 1 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2073 341 PANTHER - 76 329 - -
Gso8g2073 341 Gene3D Kinase associated domain 1, KA1 262 340 - -
Gso8g2073 341 CDD CIPK_C 269 327 - -
Gso8g2073 341 Pfam NAF domain 265 325 IPR004041 GO:0007165
Gso8g2073 341 SUPERFAMILY Protein kinase-like (PK-like) 93 233 IPR011009 -
Gso8g2073 341 Pfam Protein kinase domain 93 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2073 341 SMART serkin_6 18 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2073 Gso-Chr8 22175827 22191912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2073 43 329 CBL-interacting serine-threonine protein kinases AT1G01140 59.322 5.95e-111 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso8g2073 Pkinase 2.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2073 - - gmx:106794280 516.153