Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2064 ATGTTTCTGAAATGTTTTGGCTGCACAAGTTCATCTCAGAGAAAGTATCCAACAATAATAGAAGAGTTGTGCCATCAATTTTCTCTGGCCGATGTTTGGAAATCAACCAACAACTTTGATAAAAACAGATTAATAGGATGTGATGGAATTAGTGAAGTATATAAGGGTTGTCTCCAACATAATGATCGTTCTGATTATACAGTCACATTTAAGCGATTTATTGCAGAACGTTGTTATCCACCACTGGACGACCTGTTCAAGAATGAAATAGAATTGCTCTGCCAGATACGTCACCCTAATTGTGTCTCTCTTATAGGATTCTGCAGCCACAAAAATGAGAGAATTAGTGTGTATGAGTACATGTCCAATGGATCTCTAGATCGATACCTTGAAGGATCTATAGATCGACATTTACAAGGTGGGGATATGGAAGCACTGTCATGGAAGAAAAGGCTAGAGATATGCATAGGGGCAGCTCGTGGATTACACTACCTTCACGCTGGAGCCAAGCGCACCATCTTTCACCGTGACATTAAACCCAGCAACATTCTTTTGGATCACAACATGGAGCCAAAACTTGCAGGTTTCATCTTTAGCATAAAAGGACCACATTCTATGTCAAAGCCAAAACCAATTCAAGCTTATGTTGCTGGTACTTCAGGCTTCACGGCTAGGGAGCATATTATTGATGGTACCGTCACAGATAAATGTGATGTTTACTCATTTGGTGGGGTTCTACTAGAAGTTTTGTGGGGAAGGAAATATGTAATATCGCCATTTGAAAAAGAATTTCTGGAGAAACCTATTGAGGAGAAAATTGATCTGAATATCAGAGGAAAAATTGCACCTGATTGTTGGAAAGTCTTTTCAGATATCACACAAAGATGCTTGAAATTGGAAGCAGATGAGCGACCAACAATGGGTGAAGTAGAGGTGGAACTTGAGCATGCTCTGTCCTTACAGGATCAAGCAGATATAGTAAACACCAATGGTGATTATACCTTATTGTCCAAAACCTTTATTCCCCTGGGATCATTTTGA 1041 0.3958 MFLKCFGCTSSSQRKYPTIIEELCHQFSLADVWKSTNNFDKNRLIGCDGISEVYKGCLQHNDRSDYTVTFKRFIAERCYPPLDDLFKNEIELLCQIRHPNCVSLIGFCSHKNERISVYEYMSNGSLDRYLEGSIDRHLQGGDMEALSWKKRLEICIGAARGLHYLHAGAKRTIFHRDIKPSNILLDHNMEPKLAGFIFSIKGPHSMSKPKPIQAYVAGTSGFTAREHIIDGTVTDKCDVYSFGGVLLEVLWGRKYVISPFEKEFLEKPIEEKIDLNIRGKIAPDCWKVFSDITQRCLKLEADERPTMGEVEVELEHALSLQDQADIVNTNGDYTLLSKTFIPLGSF* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2064 346 Pfam Protein tyrosine and serine/threonine kinase 43 312 IPR001245 GO:0004672|GO:0006468
Gso8g2064 346 Gene3D Transferase(Phosphotransferase) domain 1 121 335 - -
Gso8g2064 346 SUPERFAMILY Protein kinase-like (PK-like) 14 317 IPR011009 -
Gso8g2064 346 Gene3D Phosphorylase Kinase; domain 1 6 120 - -
Gso8g2064 346 ProSiteProfiles Protein kinase domain profile. 39 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2064 346 PANTHER OS07G0166700 PROTEIN 10 337 IPR045272 GO:0004714|GO:0006468
Gso8g2064 346 SMART serkin_6 39 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2064 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Gso8g2064 346 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2064 Gso-Chr8 22047801 22053333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2064 18 322 Receptor kinase-like Gene Family AT5G59700 39.873 1.11e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso8g2064 PK_Tyr_Ser-Thr 4.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2064 - - gmx:100305392 711.449