Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2057 ATGGCTTTGTTCATAGTGGTTCTTGTTGTTGTTGCCTTGGTGCTCTGTTTTTGCACTGCTCTCTTGAAGTGGAATGAAGTGAGGTATAGGAGGAAAGGTTTGCCTCAAGGCACAATGGGGTGGCCTGTTTTTGGGGAGACAACTGAATTTCTTAAGCAAGGTCCAAACTTCATGAAGAACAAGAGAGCAAGGTATGGCAGTTTTTTCAAATCCCACATCCTGGGGTGTCCTACCATTGTATCCATGGATCCAGAGCTTAATAGATACATACTCATGAATGAAGCAAAAGGGCTTGTTCCAGGGTACCCACAATCCATGTTAGATATTTTAGGCACACGCAATATTGCAGCCGTTCATGGCTCCACTCACAAGTACATGAGAGGAGCACTTCTTTCAATCATTAGCCCCACCTTGATCAGAGACCTGCTTTTACCAAAAATTGATGAGTTCATGAGAACCCACTTGAGTGATTGGGAGAACAAAGTCATTAACATCCAAGAGAAAACTAAAGAGATGGCATTTCTCTCTTCCCTGAAGCAGATTTCTGGTATGGAATCCAGCTCAATTTCTCAACCCTTCATGACCGAGTTTTTTAAACTAGTTTTAGGAACTCTATCTTTGCCTATTAACCTTCCTGGCACAAATTATTGCCGTGGATTGCAGGCAAGAAAGAGTATTATCAGCATTCTTAGTCAGCTGCTAGAGGAAAGGAAATCATCTCAAGAAGCCCACGTAGACATGCTTGGTTGCTTGATGAATAGAGATGAAAATCGATACAAACTAACTGATGAGGAAATCATTGATCTAATTATTACAATTATGTATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCACTAAAGTATCTCCATGACCATCCCAAAGTTCTTGAAGAAATAAGAAAAGAGCATTTTGCCATCAGGGAAAGGAAAAAGCCAGAGGATCCAATTGATGGTAATGATCTCAAATCAATGAGGTTTACTCGTGCGGTGATTTTTGAGACCTCGAGATTAGCTACAACAGTTAATGGGGTTCTAAGAAAAACAACTCATGACATGGAACTAAACGGCTATTTGATTCCTAAAGGGTGGAGGATATATGTATATACGAGAGAGATCAATTATGATCCATTTCTGTATCATGATCCACTAGCATTCAACCCATGGAGATGGCTGGGTAACAGTCTTGAGTCACAAAGCCACTTCTTGATATTTGGAGGAGGGACCAGACAATGTCCTGGGAAGGAGTTGGGGATAGCAGAAATTTCCACTTTCTTACACTACTTTGTAACTAGATACAGGTGGGAAGAAGTAGGAGGAGGTAAACTAATGAAATTCCCTAGAGTTGTGGCACCAAATGGACTGCACATAAGGGTCTCGCCTTACTAA 1395 0.4093 MALFIVVLVVVALVLCFCTALLKWNEVRYRRKGLPQGTMGWPVFGETTEFLKQGPNFMKNKRARYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGTRNIAAVHGSTHKYMRGALLSIISPTLIRDLLLPKIDEFMRTHLSDWENKVINIQEKTKEMAFLSSLKQISGMESSSISQPFMTEFFKLVLGTLSLPINLPGTNYCRGLQARKSIISILSQLLEERKSSQEAHVDMLGCLMNRDENRYKLTDEEIIDLIITIMYSGYETVSTTSMMALKYLHDHPKVLEEIRKEHFAIRERKKPEDPIDGNDLKSMRFTRAVIFETSRLATTVNGVLRKTTHDMELNGYLIPKGWRIYVYTREINYDPFLYHDPLAFNPWRWLGNSLESQSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGGKLMKFPRVVAPNGLHIRVSPY* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2057 464 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g2057 464 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g2057 464 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g2057 464 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g2057 464 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g2057 464 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g2057 464 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g2057 464 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 462 - -
Gso8g2057 464 SUPERFAMILY Cytochrome P450 28 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g2057 464 PANTHER CYTOCHROME P450 26 7 462 - -
Gso8g2057 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Gso8g2057 464 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g2057 464 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g2057 464 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g2057 464 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g2057 464 Gene3D Cytochrome P450 25 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g2057 464 Pfam Cytochrome P450 35 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2057 Gso-Chr8 21911304 21915436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2057 82 464 Cytochrome P450 AT5G38970 69.271 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2057 K09590 - gmx:100818290 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2227 18 55219396 55223658 Gso8g2057 8 21911304 21915436 GST
Gso13g0351 13 15033326 15036861 Gso8g2057 8 21911304 21915436 PCT
Gso19g0297 19 4377964 4381869 Gso8g2057 8 21911304 21915436 PCT
Gso8g2057 8 21911304 21915436 Gso13g0351 13 15033326 15036861 PCT
Gso8g2057 8 21911304 21915436 Gso19g0297 19 4377964 4381869 PCT