Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2050 ATGGCAAAGGAGAACGCAGCGTGCGTGCTGCTAAGACTCTCGCAGGTGGAGGAGAGCAAGGCAGCGATCGGGCGGTCCGGCGCGATTCCACTGCTGGTGTGCCTCCTGGAGAGTGGGGGGTTCCATGCGAAGAAGGATGCATCGACGACGCTGTACTCGTTGTGCATGGTGAAGGAGAACAAGACCAGGGCGGTGAAGGCGGGGATCATGAAGGTGCTGGTGGAGCTGATGGCAGACATTGAGTCAAACATTATGGACAAGTCGGCATACGTGGTGAGCGTGCTGGTGGCAGTACCGGAGGCGAGGGCGGCGCTGGTGGAGGAAAGAGGCATGCCGGTGCTGGTGGAGATCGTCGAGGTTGGGATGTAG 369 0.6016 MAKENAACVLLRLSQVEESKAAIGRSGAIPLLVCLLESGGFHAKKDASTTLYSLCMVKENKTRAVKAGIMKVLVELMADIESNIMDKSAYVVSVLVAVPEARAALVEERGMPVLVEIVEVGM* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2050 122 Pfam Armadillo/beta-catenin-like repeat 18 55 IPR000225 GO:0005515
Gso8g2050 122 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 121 - -
Gso8g2050 122 PANTHER U BOX DOMAIN-CONTAINING 2 121 - -
Gso8g2050 122 SUPERFAMILY ARM repeat 3 118 IPR016024 -
Gso8g2050 122 Gene3D - 1 122 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2050 2 121 U-box Gene Family AT2G28830 40.833 1.84e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2050 - - gmx:100816166 223.402