Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2047 ATGGATACAAGTGGCACACGAATTGCTTTAGGAACAATCCTCCCCATCCTGTTGTTGTGCCTCCCTTACTTTTCTATAGCAGTTGATGTTATTTACCGTCCCGTTGAACTCTTGAGCATCAACTGTGGCTCTTCCAGTAACTTTTCCACTCTCGATGGTCGGAATTGGACTGCAGACATCAAATTCCTCTCAGAAAACAAGGACTCGGTTGCTGCTTCTGCTCTCACACCGTCTACCCAACAGGGTCCATACACCTATGCTCGTTTCTCTCACTCCCAATTCACTTACTCCTTTCCCGTCTCCGCAGGCCCAAAGTTCCTTCGCCTCTTCTTCTACTCAACTTCCTACCAAAACTTCGATCGTTCCAAATCCGATTTCTCAGTCAAAGCAGGCCCTTACACCCTCCTCCATGATTTCAACGCTTCCCTCAATGCTGATGCTGGGGACGAGCCTGGCAACTACTTGTTCAGAGAATATTGCATCAACCTCAAAGATGGAGAGAGGCTCAACATAACCTTCATTCCAAGCACCACAGATTCGTATGCTTTCATCAATGGAATCGAGGTTGTTTCAATGCCCCCTTATCTCTACTACACCAATCTTGACGACAACACTGGATTCCCGCAAATTGTTGGAGGAGTAACATATACTATTGAAAGCAAATCAGCTCTGGAGAAAATATACCGGTTAAACGTTGCTGGAACAAATATCCCCCCAACTGGGGACACGGGTATGTTAAGAACCTGGGAAGCCGATGACAACTACGTAACAACTCAAAGTAACATATCTGTTGATTTTGGGGGTATAACTAAGCTCAGCTTCACTACTGCGACTGAAAACTACACGGCACCAGACAAAGTGTACCGATCCTCAAGGAGTATGGGAACTAGTGGCTCTTTGAACATGGGATTCAACCTCACATGGCAGCTTCCTGTTGATTCTGGCTTTACCTACTTGTTAAGGTTACACTTTTGCCAGCTTGACCCGCATGTTCATCAGGCTGGTGACCTGGAATTCTACATCTACATAGCGGATCAGTTGGCTACCGATAGGGCAGACGTTCTCTTATGGACCATTAACCAGAAGGCTGTCCCAGTGGTTACAGACTACATAGTTTCCATCCCGGTGAATCAGAAGAAACCAAATATTTCACTGAAACTGCATCCTCACCCTAAAAGCAGAATCAAGGATGCACAACTAAACGGAATTGAACTTTTCAAAATCAACCACTCAACAGGTAATCTCGCTGGACCGAACCCAGACCCTCATCCAAAGACCTTTGAATTTCCTCTTCAAAGCAAAAACAAGAAAAGCAAAGGGAGGACGGGAACCATAACTGCCGCCGTTGCTGGCGCAGTTTCCGGTGTCGTTATGCTCTCCCTTATTGTCGCTTTCTTCCTCATCAAACGCAAGAAGAACGTGGCCATCGACGAAGGTTCCAATAAAAAAGATGGAACTTCTCAAGGGGGTGGCTCACTACCAGCCAACCTCTGCCGTCACTTCTCAATAGCAGAAATCAAAGCAGCTACCAATAACTTCGACGAACTCTTAGTGGTTGGTGTGGGAGGCTTTGGCAACGTGTACAAAGGCTACATAGACGAAGGTTCAACACATGTCGCAATCAAAAGGCTCAAACCCGGTTCTCAGCAAGGTGAGCAGGAGTTTGTGAACGAGATCGAAATGCTGTCTCAACTTCGTCATCTCAATCTTGTTTCCCTCATAGGTTACTGTTACGAGAGCAATGAGATGATACTCGTTTATGATTTCATGGATCAAGGAACCCTCTGTGAGCATCTCTACGGCACCGATAACCCTTCCCTCTCATGGAAGCAAAGGCTCCAGATCTGCATAGGTGCTGCACGAGGATTGCACTATCTGCATACAGGTGCAAAGCACATGATCATTCACCGTGACGTCAAGAGCACCAATATCTTATTGGATGAAAAATGGGTGGCCAAGGTTTCAGACTTTGGGTTATCCAGAATTGGGCCCACGGGTTCTTCAATGACCCATGTGAGCACTAAGGTTAAAGGTAGCATTGGATATTTAGACCCAGAGTATTACAAACGACAGCGTTTGACTGAGAAGTCTGATGTCTACTCGTTTGGGGTGGTGCTCTTGGAGGTATTGTCTGGGAGGCAGCCCTTGATCCGCACTGCAGAGAAGCAAAAGATGTCACTGGTTGATTGGGCAAAGCATCGCTACGCAAAGGGATCTCTGGGTGAGATTGTGGATCCTGCACTGAAGGGCCAGATAGCAACTGAGTGTATACACAAATTTGGTGAGGTTGCGCTGAGTTGTTTGCTTGAGGATGGGACTCAAAGGCCCTCCATGAAGGACGTCGTTGGGATGCTGGAGTTTGTTCTGCAGCTTCAGGACAGTGCTGTTAATGGAGTGGTGGTCAGTGGTGGGCATTATGAAGATAGTGAGGATATGTTTAGCAGTACCCATAGTAGTATACAACTTTCGAATTATAGTAACAGCACTGGATTGAACACCACGAGCTATGGCAGTAAGGAATCTGACAGGTTGATCCCGGAGAATGTTTTCTCTGAGATTAAGAATCCAGAGGGGCGATAA 2580 0.4647 MDTSGTRIALGTILPILLLCLPYFSIAVDVIYRPVELLSINCGSSSNFSTLDGRNWTADIKFLSENKDSVAASALTPSTQQGPYTYARFSHSQFTYSFPVSAGPKFLRLFFYSTSYQNFDRSKSDFSVKAGPYTLLHDFNASLNADAGDEPGNYLFREYCINLKDGERLNITFIPSTTDSYAFINGIEVVSMPPYLYYTNLDDNTGFPQIVGGVTYTIESKSALEKIYRLNVAGTNIPPTGDTGMLRTWEADDNYVTTQSNISVDFGGITKLSFTTATENYTAPDKVYRSSRSMGTSGSLNMGFNLTWQLPVDSGFTYLLRLHFCQLDPHVHQAGDLEFYIYIADQLATDRADVLLWTINQKAVPVVTDYIVSIPVNQKKPNISLKLHPHPKSRIKDAQLNGIELFKINHSTGNLAGPNPDPHPKTFEFPLQSKNKKSKGRTGTITAAVAGAVSGVVMLSLIVAFFLIKRKKNVAIDEGSNKKDGTSQGGGSLPANLCRHFSIAEIKAATNNFDELLVVGVGGFGNVYKGYIDEGSTHVAIKRLKPGSQQGEQEFVNEIEMLSQLRHLNLVSLIGYCYESNEMILVYDFMDQGTLCEHLYGTDNPSLSWKQRLQICIGAARGLHYLHTGAKHMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTGSSMTHVSTKVKGSIGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLSGRQPLIRTAEKQKMSLVDWAKHRYAKGSLGEIVDPALKGQIATECIHKFGEVALSCLLEDGTQRPSMKDVVGMLEFVLQLQDSAVNGVVVSGGHYEDSEDMFSSTHSSIQLSNYSNSTGLNTTSYGSKESDRLIPENVFSEIKNPEGR* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2047 859 SUPERFAMILY Protein kinase-like (PK-like) 493 788 IPR011009 -
Gso8g2047 859 SMART serkin_6 513 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2047 859 Pfam Protein tyrosine and serine/threonine kinase 519 784 IPR001245 GO:0004672|GO:0006468
Gso8g2047 859 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Gso8g2047 859 Gene3D Phosphorylase Kinase; domain 1 498 589 - -
Gso8g2047 859 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Gso8g2047 859 CDD STKc_IRAK 528 786 - -
Gso8g2047 859 ProSiteProfiles Protein kinase domain profile. 513 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2047 859 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 30 832 - -
Gso8g2047 859 Pfam Malectin-like domain 40 408 IPR024788 -
Gso8g2047 859 PANTHER OS07G0166700 PROTEIN 30 832 IPR045272 GO:0004714|GO:0006468
Gso8g2047 859 Gene3D Transferase(Phosphotransferase) domain 1 590 801 - -
Gso8g2047 859 Gene3D - 36 192 - -
Gso8g2047 859 Gene3D - 223 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2047 Gso-Chr8 21717547 21723786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2047 32 859 Receptor kinase-like Gene Family AT3G51550 48.369 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso8g2047 Malectin_like 7.9e-44 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2047 - - gmx:100814046 1684.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2214 18 55111161 55114140 Gso8g2047 8 21717547 21723786 GST