Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2043 ATGGCTTCTAGCAATGGCCGAAAAGCAAGTGAGATCTTTCAAGGCCAAGCTCTCATATACAGACACATGTTTGCCTTCATAGATTCTATGTGCCTCAAAACGATTATTGAGCTTGGAATACCAGACATAATCCACAAGCACGGCCAACCCATTACTCTTTCTGAGTTGGTGTCAATTCTACATGTTCCACCAGCTAGAGTAGGTCACGTTCAGAGCCTCATGCACTACCTGTCACACCATAGATTCTTTGAAAGTGTAAGAATCCATGAAAAAGAAGCATATGCTCTCACTGCTGCTTCAGAGCTACTTGTAAAAAGCAGTGAACTTTCTTTAGCTCCAATGGTTGAGTACATCCTTGATCCAACTCTATCAGCTTCATTCCATCAAATGAAAAAGTGGGTTTATGAGGAAGATCTCTCAGTATTTGATATCTCCTTAGGGTGTAGTTTATGGGATTTTCTTAACAAAAACCCTGCATACAACGAGTCATTCAATGAGGCAATGGCTAGAGATTCTCAAATGAGTAATTTGGCATTGAGAGATTGCAAGTTGGTGTTTGAGGGACTGGAATCCATTGTGGATGTTGGTGGTGGAACTGGAGCCACTGCCAGGATGATCTCTGAAGCATTTCCTGACTTGAAATGCGTTGTGCTTGACCGTCCTCACGTTCTGGAGAACTTGTCCGAAAGCAACAATTTGACATATGTTGGTGGGGACATGTTCAAATCTATTCCTAAGGCTGATGCAGTTCTGCTTAAGTGGATTCTTCATGATTGGACTGATAAAGACTGCATAAAGATATTAGAGAATTGTAAAGAAGCTATTTCTTCAAATAATGGCAAAAGAGGAAAAATAATCGTCATAGATATGGTGATACAAGAAAAGCAAGATGAGCATAAAGTTACAGAACTAAAGCTCCTTTGGGATGTAGCCATGGCATGTGTATTAAATGGAAAAGAGAGAAATGAAGAAGAATGGAAGAAACTCTTCATGGAAGCAGGGTTCCAAGACTACAAAATATCTCCCTTGACCGGGTTTCTGTCTCTTATTGAGATCTATCCTTAG 1065 0.4038 MASSNGRKASEIFQGQALIYRHMFAFIDSMCLKTIIELGIPDIIHKHGQPITLSELVSILHVPPARVGHVQSLMHYLSHHRFFESVRIHEKEAYALTAASELLVKSSELSLAPMVEYILDPTLSASFHQMKKWVYEEDLSVFDISLGCSLWDFLNKNPAYNESFNEAMARDSQMSNLALRDCKLVFEGLESIVDVGGGTGATARMISEAFPDLKCVVLDRPHVLENLSESNNLTYVGGDMFKSIPKADAVLLKWILHDWTDKDCIKILENCKEAISSNNGKRGKIIVIDMVIQEKQDEHKVTELKLLWDVAMACVLNGKERNEEEWKKLFMEAGFQDYKISPLTGFLSLIEIYP* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2043 354 CDD AdoMet_MTases 192 288 - -
Gso8g2043 354 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Gso8g2043 354 Gene3D - 1 103 IPR036388 -
Gso8g2043 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 352 IPR029063 -
Gso8g2043 354 Pfam O-methyltransferase domain 127 336 IPR001077 GO:0008171
Gso8g2043 354 SUPERFAMILY "Winged helix" DNA-binding domain 10 107 IPR036390 -
Gso8g2043 354 PANTHER O-METHYLTRANSFERASE 2 353 IPR016461 GO:0008168
Gso8g2043 354 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 353 - -
Gso8g2043 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Gso8g2043 354 Gene3D Vaccinia Virus protein VP39 104 354 IPR029063 -
Gso8g2043 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 354 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2043 Gso-Chr8 21594999 21596612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2043 25 352 Monolignol Biosynthesis Gene Families AT5G54160 32.440 3.76e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2043 K22588 - gmx:100779638 706.057