Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2042 ATGTTTATCAAATTTTTGGGCTTCTGCTGGTCGAAGCATACAAGTTCATCTCAGAGACAGTATCCTACAGTGATAGAAGAGCTGTGCTATCAATTTTCACTTGCTGATATTAAGAAATCAACCAAAAACTTTGATGAAGACCAACTAATTGGAACTGGAGATATGTGTATTGTATATAAAGGTTCTCTCCAACATAATGGTGTTACTGAGGATACAGTTGTAATCGGGCGAATACATGGGAGCGCTGAGAAAGAGCTTAAGCAATTCAAGAATGAAATTGAGTTGCTTTGCCAGCTTCGGCATCCTAATTTGATCACTCTATTAGGATTTTGTGACCACAAAGATGAGAAGATTCTTGTATATGAGTACATCCCCAATGGATCTCTCCATGATCGCCTATACTGTAGTGATGTGAAAAAGGAACCACTAACATGGAAGCAGAGACTAAAGATCTGCATAGGAGCAGCACGTGGACTACACTTCCTTCACACTGGTGTCAAGCGAACCATCTTTCATCGTGACGTAACACCTTATAAAATTCTTTTGGGTAGCAACATGGTGGCCAAACTTGCAGACTTCCGGCTTTCCTTAACAGGACCGCATTATGCATCAAAGCCAAAACCAAAGACAATTTCAAAAGATGGCTTTATAGGTACATATGGTTATGTGGCTCCTGAGATTTCCGAAAACAATACAATAACAGAAAAATGTGATGTTTATTCCTTTGGGGTAGTGCTACTGGAACTGGTATGCAAAGACAAGCTAAAAGATGTTGAGAAGCGGGAGAAGCACCCTGTTGAGGAGAATATTGATCCGAATATCAAAGGAAAGATTGCACCAGAGTGTTGGGAAGTATTTATGGATATCACAGAAAGATGCTTGAAGTTTGATCCGAATGAGCGACCAGCAATGGGTGAAGTGGAGGTGCAACTTGAGCTTGCTCTGTCACTGCAGGAAGAAGCAGATATAATAAATACTGGCGATGATTATACCCTATTATCGATGATCATTATGAATTAA 1020 0.4 MFIKFLGFCWSKHTSSSQRQYPTVIEELCYQFSLADIKKSTKNFDEDQLIGTGDMCIVYKGSLQHNGVTEDTVVIGRIHGSAEKELKQFKNEIELLCQLRHPNLITLLGFCDHKDEKILVYEYIPNGSLHDRLYCSDVKKEPLTWKQRLKICIGAARGLHFLHTGVKRTIFHRDVTPYKILLGSNMVAKLADFRLSLTGPHYASKPKPKTISKDGFIGTYGYVAPEISENNTITEKCDVYSFGVVLLELVCKDKLKDVEKREKHPVEENIDPNIKGKIAPECWEVFMDITERCLKFDPNERPAMGEVEVQLELALSLQEEADIINTGDDYTLLSMIIMN* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2042 339 PANTHER OS07G0166700 PROTEIN 14 334 IPR045272 GO:0004714|GO:0006468
Gso8g2042 339 SUPERFAMILY Protein kinase-like (PK-like) 19 315 IPR011009 -
Gso8g2042 339 ProSiteProfiles Protein kinase domain profile. 44 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2042 339 PANTHER TYROSINE KINASE FAMILY PROTEIN 14 334 - -
Gso8g2042 339 Gene3D Transferase(Phosphotransferase) domain 1 124 331 - -
Gso8g2042 339 Pfam Protein tyrosine and serine/threonine kinase 47 310 IPR001245 GO:0004672|GO:0006468
Gso8g2042 339 Gene3D Phosphorylase Kinase; domain 1 3 123 - -
Gso8g2042 339 Coils Coil 79 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2042 Gso-Chr8 21560395 21563411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2042 11 322 Receptor kinase-like Gene Family AT3G51550 41.718 6.73e-73 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso8g2042 PK_Tyr_Ser-Thr 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2042 - - gmx:100779112 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2200 18 54986879 54989510 Gso8g2042 8 21560395 21563411 GST