Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2039 ATGTCTGGAAAGGCTTTGAAATCCTTGAAGGATGAAAACCCAGATTTGCAGAAGCAAATTGGGTGCATCACTGGATTTTTTCAGCTCTTTGACCGCCACCGTTTCCTCACAGGCCAACGCTCTGCCACCTACGTTCAGCACAGGCCTACTTCAGGTGGAAGCAGTAATGAAATCAAAGAGCTCAATGGTACAAAGCAGGAAGCTAAGGCAAAGAATCTGAAGACTGCTAGAGAAAAGCAACAATTCTCCACAGAATCATCCATAACTTCTTTTTCTTCATCATCTTGTTCATCTAGCATGTCATCCCATGAGTTTAACAAAACAATTCAGATACAATCACCGTCAAGAAATCGAATCAGAATTCCAGAAAACACAAATTCAAAAGCAGCAAAGAAGCAACCTGATACCCCGCACCAGCAATCCCTCCATTTCCATCATATTGTCAACGACTCAATGCATAAAGAAACTCAAGGATTGTCTGTGAAAATTGGGGCTAAAGAGGAAAAGAAGGGTCAGACTAATGCCTTGAAACACATTGATTCCCCCCGGCCTTTGCAGTCACACAAATATGTGAATGCAGGAGTTACAGTTGCCAGTGAACCTTTACATACTATTGCAAAGTCTAAGAAAAAACCTTGGGACTCACCACGGCTCTCTTATGATGAAACATTCAAATCTGCCACAAAGCACAAGGAACTTCCAAGACTTTCTTTGGACAGCAGAGAAGGGTCCAATAGAGGTTTCAATGAAGGAAACAAGTCTCACAACCAGTTGAAGGGTTCACCGAGAGGGTACGGGAGAAACTCCAGCACAATGATTAACCATCTGCAAGAACAAGAAACTTCCAAAAGGTCTTCCAGTGTTGTAGCTAAGTTGATGGGACTTGAAGCCCTCCCTGAGTGTACACAAACTTGTGGGAGTCCAATGGGAACTTCTAGTTGTTCTTCCAAAAAGAATGAGCTCTTGGCAAGATCTAGTACAAGTGATGAAAAGCAACACCAAAGATTCAGCTTGCCTCAGTCTAGAAGGGCTGATTTAATCGCAAATGTGACACCGTGTTCACGGTTTGCACTAGAACCAACTCCATGGAGGCAACCTGATGAAAGCCAAAGCTCTCCATTACAAGCTTCCAAGGGAAGTGAATCTGATATAAAAGCCTCAAAGTCCTCTCTCACTGTGTACGGGGAAATTGAGAAAAGGGTGGCAGAACTTGAGTTCAAAAAGTCTGGAAAGGATCTCAGAGCCCTTAAACAGATTCTTGAAGCAATGCAGAGACATAAGGATTCAGTAGACATTTCTAGAGACCATGCTTCAAATTCTCCATCTGACAATAGGAATTGTACTAATCTCAATGAAAGCTCGAAATCTCAGAGCCCAAGAGTACGACAAAAAGATCCGGCATCTGTCACGGTTGAGATGTCAAATTCAACCCGGGTTAGTAAATTGCCAATCGTCATCATGAAACCTTCAAAAGTTACTAGGAAACCAAATAATCCTTCCTCTACAGAAATATCAATTCATGCTAAATCTGGTCCCAGCAAGTGTTCCCCTAGTAATCCCACAAATGGAAGATTGGTTGACAGGCAAACTACTATAGGTATCAGTTCGACAACAAAAAATATCAAGGATCCTTTTGGACAACAAGTTCTTTCATCTGATAAAAACAACATGAGAACTTCAAAGTTGATGCAATCCTTGAAAGTTTCTCAAGACAACACTGGAGAATGCACCACCAACTCTGGTTATACAACCGTGACTGGCAGCCCCAGACTACAAAAGAAGTTTGGTTTGGAGAGGTGTTCGCAACCAACCAGTCCATCATCAGATTCCAGAATTAACAGAAGAGGGCATGATAGGCAACCTGTGGAATTGTCTTCTCCAAGTACAACACCAAGACATAAGTTCTCCACTTTGCAGCAAAGAAATGAACGTTTCACTGAAATCAGCTGTCACTTGAGGGATTTTAAGCATCATGTTAACATCATTTCGGATTTTGACAACAAAAGCAGCTCGGCCAGTCATAGTGACATTGAAGTCATTCGCATTGATCAATCTAGAAAGATCATTAGCTCCTCCATCCAGCTGAGTGGCATGAACCAAAACAATGCATTTGAAGAGTTGAGGAAGGCGGAGACAATGATTACTGCAGAACAACCAAGCCCTGTGTCTGTTCTTGATGCTGCATTCTATAGGGATGACCCACCATCTCCAGTGAAAAAGAAATCAGACATCTCAAAAAATTTAGGTGAAGCTCTAAGCACTGATGAGGATAGTGAAGAGAGCTCAGTGGATCTACTTCAAGAAATTGAGTGGATTGATGAGAAACTCATCAATTTCAATAACACTAGGGATCCTGACCATAAGTATATAGCAGAAATACTGTTAGCATCAGGTCTGCTCAGTGGCCACAGCTATAGCCAGATATTCCATTCGCCGGGTCATTTGGTTGATCCAAAGTTGTTCTTTGCACTTGAACAAATGAAGACAAAGATGCATTTTAACATTAAAGACAGTGCCAAGAAGATTCGTAGGATTATTAACCCTGAGAAAATGCAAAGGAAACTCATATTTGATGTTGTCAATGACATTTTAGTTCAAAAGCTGATATTGGATAATTCTTCTGCATTGTGGTGCCAACCAAATGAGTTAGCAGGCACAACACTAAAAGGGAAGCAGCTTTTGGATGAGCTATGCACAGAAATTGATCAGTTGCAACCTCAAAATAGGAATTTCAGTTTAGTTCATGAGGATGAGAATTTGAAGCATCACCATGCAATTTGGACTAATTGCTGCAATGAGATGCCAAATATTGTGTTGGATATTGAACGTTTGATCTTTAAAGATTTGATAACTGAGGTTGTGAGAGGTGAAGTAGCAAACCATTCTGGTAGACATTGCAGGCAACTGGTGTTTTACAATTAG 2922 0.412 MSGKALKSLKDENPDLQKQIGCITGFFQLFDRHRFLTGQRSATYVQHRPTSGGSSNEIKELNGTKQEAKAKNLKTAREKQQFSTESSITSFSSSSCSSSMSSHEFNKTIQIQSPSRNRIRIPENTNSKAAKKQPDTPHQQSLHFHHIVNDSMHKETQGLSVKIGAKEEKKGQTNALKHIDSPRPLQSHKYVNAGVTVASEPLHTIAKSKKKPWDSPRLSYDETFKSATKHKELPRLSLDSREGSNRGFNEGNKSHNQLKGSPRGYGRNSSTMINHLQEQETSKRSSSVVAKLMGLEALPECTQTCGSPMGTSSCSSKKNELLARSSTSDEKQHQRFSLPQSRRADLIANVTPCSRFALEPTPWRQPDESQSSPLQASKGSESDIKASKSSLTVYGEIEKRVAELEFKKSGKDLRALKQILEAMQRHKDSVDISRDHASNSPSDNRNCTNLNESSKSQSPRVRQKDPASVTVEMSNSTRVSKLPIVIMKPSKVTRKPNNPSSTEISIHAKSGPSKCSPSNPTNGRLVDRQTTIGISSTTKNIKDPFGQQVLSSDKNNMRTSKLMQSLKVSQDNTGECTTNSGYTTVTGSPRLQKKFGLERCSQPTSPSSDSRINRRGHDRQPVELSSPSTTPRHKFSTLQQRNERFTEISCHLRDFKHHVNIISDFDNKSSSASHSDIEVIRIDQSRKIISSSIQLSGMNQNNAFEELRKAETMITAEQPSPVSVLDAAFYRDDPPSPVKKKSDISKNLGEALSTDEDSEESSVDLLQEIEWIDEKLINFNNTRDPDHKYIAEILLASGLLSGHSYSQIFHSPGHLVDPKLFFALEQMKTKMHFNIKDSAKKIRRIINPEKMQRKLIFDVVNDILVQKLILDNSSALWCQPNELAGTTLKGKQLLDELCTEIDQLQPQNRNFSLVHEDENLKHHHAIWTNCCNEMPNIVLDIERLIFKDLITEVVRGEVANHSGRHCRQLVFYN* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2039 973 MobiDBLite consensus disorder prediction 305 343 - -
Gso8g2039 973 MobiDBLite consensus disorder prediction 622 640 - -
Gso8g2039 973 MobiDBLite consensus disorder prediction 323 338 - -
Gso8g2039 973 MobiDBLite consensus disorder prediction 357 388 - -
Gso8g2039 973 MobiDBLite consensus disorder prediction 435 472 - -
Gso8g2039 973 MobiDBLite consensus disorder prediction 493 590 - -
Gso8g2039 973 Pfam Domain of unknown function (DUF4378) 786 952 IPR025486 -
Gso8g2039 973 MobiDBLite consensus disorder prediction 427 472 - -
Gso8g2039 973 PANTHER LONGIFOLIA PROTEIN 1 765 IPR033334 GO:0051513
Gso8g2039 973 PANTHER LONGIFOLIA PROTEIN 763 972 IPR033334 GO:0051513
Gso8g2039 973 MobiDBLite consensus disorder prediction 62 78 - -
Gso8g2039 973 PANTHER LONGIFOLIA PROTEIN 763 972 - -
Gso8g2039 973 PANTHER LONGIFOLIA PROTEIN 1 765 - -
Gso8g2039 973 MobiDBLite consensus disorder prediction 305 322 - -
Gso8g2039 973 MobiDBLite consensus disorder prediction 364 388 - -
Gso8g2039 973 MobiDBLite consensus disorder prediction 44 61 - -
Gso8g2039 973 MobiDBLite consensus disorder prediction 231 269 - -
Gso8g2039 973 Coils Coil 58 78 - -
Gso8g2039 973 MobiDBLite consensus disorder prediction 242 269 - -
Gso8g2039 973 MobiDBLite consensus disorder prediction 79 138 - -
Gso8g2039 973 MobiDBLite consensus disorder prediction 491 640 - -
Gso8g2039 973 MobiDBLite consensus disorder prediction 44 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2039 Gso-Chr8 21479031 21484828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2039 142 972 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 30.968 4.44e-84 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2039 - - gmx:100808151 1901.33