Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2037 ATGATTAAGAGCCAAAAAGAAGCAGATTTTCAATTAAAACAGGAGGGTCTTTCTCAATCAATTAATGATCCTGAAAAGGCAAAGGCTACATCAAGCTCAGTAGCACAATGGCCAAGATTGAAGGATCCAAGGATTGTTCGAGTATCCAGAGCCTTTGGAGGAAAAGACAGGCATAGCAAGGTTTGCACTATAAGAGGGTTAAGAGACAGACGGGTGAGGCTATCAGTACCAACTGCCATCCAACTCTATGATCTTCAAGATAGGCTAGGGCTCAGTCAACCTAGCAAGGTTGTTGATTGGTTGCTCAATGCAGCTAAGCATGAAATTGATGAACTTCCACCACTTCCCATTATTCCTTCAGTGAATAACTTCACCCTTGGTTATCCATCTGCTGTTACTTCTAATGAAGCTACCACCTCAAATTCTCAGCCTAATGAGCAACTTCTTAATATCAACAGAAGCATTCAATGGGAAGATTCAAACCATAATTCTACATGGAAATTAAAGGCTAAAGAAGTTTCAGGAGAAATGGTTAGCACTGATAAACCAAATTGGATAAGTAGAAGTGAAGAGGATAAGCAAGGAAGCAATAATCAAGGACCTAGCACACATGTTATACCAAATATTAATCTCTTACCAAGAGCAAATCTTAATCATCCTTCATTCTTGGGCTTGCTGAATACTATGCCACATGGTTACCGATGGGAACATTCTGCTGGTGATGTTTCTCATCCGTTGGGCAACAATGAATTATCAAACCTAACAGATATACACAACAATATTAACGTTGTACCTTTCCCAACATCATCATTGTCTTTATCAACTGGGAATTCTCAAATTATGCTATGTCCTCCAGGAGCAACGCAACCATATTTCCCTTCACATGTTACAGCAATGGACATGGATCCGAGGCAAATCAACCACTATCAGATGTTGAGTTCAGGTTCTGAAAATCCATTGGCGAATTCTCTCAATCATTCTTTCAGCCTGGCTATGATGGCTCATAAACCTCTTCTTTCACCCAACAGCAGCAAGAGCCCCTCTCACAAAGACCAAGATTTTCCTTAA 1068 0.4026 MIKSQKEADFQLKQEGLSQSINDPEKAKATSSSVAQWPRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNAAKHEIDELPPLPIIPSVNNFTLGYPSAVTSNEATTSNSQPNEQLLNINRSIQWEDSNHNSTWKLKAKEVSGEMVSTDKPNWISRSEEDKQGSNNQGPSTHVIPNINLLPRANLNHPSFLGLLNTMPHGYRWEHSAGDVSHPLGNNELSNLTDIHNNINVVPFPTSSLSLSTGNSQIMLCPPGATQPYFPSHVTAMDMDPRQINHYQMLSSGSENPLANSLNHSFSLAMMAHKPLLSPNSSKSPSHKDQDFP* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2037 355 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 352 - -
Gso8g2037 355 MobiDBLite consensus disorder prediction 179 203 - -
Gso8g2037 355 MobiDBLite consensus disorder prediction 1 36 - -
Gso8g2037 355 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
Gso8g2037 355 MobiDBLite consensus disorder prediction 11 36 - -
Gso8g2037 355 Pfam TCP family transcription factor 54 175 IPR017887 -
Gso8g2037 355 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 352 IPR005333 GO:0003700
Gso8g2037 355 MobiDBLite consensus disorder prediction 180 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2037 Gso-Chr8 21448022 21450344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2037 37 311 TCP Transcription Factor Family AT3G02150 39.446 2.50e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso8g2037 TCP 9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2037 - - gmx:100807091 712.605