Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2034 ATGGCTTCTTCATTAAACAATGGCCGTAAAGCAAGTGAGATTTTTCAAGGTCAAGCTCTCTTGTACAAACATTTGCTTGGCTTCATAGATTCTAAGTGTCTAAAATGGATGGTTGAGCTTGACATACCCGACATAATCCACAGCCATAGCCATGGCCAACCCATTACTTTTTCAGAGTTGGTGTCAATTCTACAAGTCCCACCAACTAAAACTCGTCAGGTGCAGAGCCTCATGCGTTATCTAGCACACAATGGATTCTTTGAGATAGTAAGAATCCATGACAACATAGAAGCATATGCTCTCACTGCTGCTTCAGAGTTACTTGTCAAAAGCAGTGAGCTTAGTTTAGCTCCAATGGTTGAGTATTTTCTTGAACCAAATTGTCAAGGTGCATGGAACCAGTTGAAGAGGTGGGTTCATGAGGAAGATCTCACAGTATTTGAGGTCTCCTTAGGAACACCTTTCTGGGACTTTATCAATAAAGACCCTGCATATAACAAGTCATTCAATGAGGCAATGGCTTGTGATTCTCAGATGTTGAACTTGGCGTTTAGAGATTGCAATTGGGTCTTTGAGGGACTGGAATCCATTGTGGATGTTGGTGGTGGAACTGGAATCACAGCAAAGATTATCTGTGAGGCTTTTCCTAAGCTGAAATGCATGGTGTTGGAACGTCCAAATGTTGTGGAAAATTTGTCAGGAAGCAACAATTTGACATTTGTTGGTGGGGACATGTTTAAATGCATCCCCAAGGCTGATGCAGTTCTGCTTAAGTTGGTTTTACATAATTGGAATGACAACGATTGCATGAAGATATTAGAAAATTGTAAAGAAGCTATTTCAGGTGAAAGCAAAACAGGAAAAGTAGTTGTCATAGATACTGTGATAAACGAAAACAAAGATGAGCGCCAAGTTACTGAACTAAAGCTCCTTATGGATGTACACATGGCATGTATTATTAATGGAAAAGAGAGAAAAGAAGAAGATTGGAAGAAACTCTTCATGGAAGCAGGGTTCCAAAGCTACAAAATATCTCCCTTCACAGGATATTTGTCTCTTATTGAGATCTATCCTTGA 1077 0.3983 MASSLNNGRKASEIFQGQALLYKHLLGFIDSKCLKWMVELDIPDIIHSHSHGQPITFSELVSILQVPPTKTRQVQSLMRYLAHNGFFEIVRIHDNIEAYALTAASELLVKSSELSLAPMVEYFLEPNCQGAWNQLKRWVHEEDLTVFEVSLGTPFWDFINKDPAYNKSFNEAMACDSQMLNLAFRDCNWVFEGLESIVDVGGGTGITAKIICEAFPKLKCMVLERPNVVENLSGSNNLTFVGGDMFKCIPKADAVLLKLVLHNWNDNDCMKILENCKEAISGESKTGKVVVIDTVINENKDERQVTELKLLMDVHMACIINGKERKEEDWKKLFMEAGFQSYKISPFTGYLSLIEIYP* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2034 358 Gene3D Vaccinia Virus protein VP39 109 358 IPR029063 -
Gso8g2034 358 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 357 - -
Gso8g2034 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 356 IPR029063 -
Gso8g2034 358 Gene3D - 2 108 IPR036388 -
Gso8g2034 358 Pfam O-methyltransferase domain 132 340 IPR001077 GO:0008171
Gso8g2034 358 SUPERFAMILY "Winged helix" DNA-binding domain 12 112 IPR036390 -
Gso8g2034 358 CDD AdoMet_MTases 197 296 - -
Gso8g2034 358 Pfam Dimerisation domain 33 82 IPR012967 GO:0046983
Gso8g2034 358 PANTHER O-METHYLTRANSFERASE 2 357 IPR016461 GO:0008168
Gso8g2034 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Gso8g2034 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 358 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2034 Gso-Chr8 21408069 21409779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2034 34 356 Monolignol Biosynthesis Gene Families AT5G54160 29.674 5.93e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2034 K22588 K23053 gmx:100776621 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2187 18 54868806 54870238 Gso8g2034 8 21408069 21409779 GST