Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso8g2030 | ATGTTTTCTTCTTCTTCAGTGATCAAATGGAGGTTCCATCACAAGCCCATGACGCTCGTGCGACTCTTCACACTCGCGTCCCTCCTTATGCTCTCTCTAAACGACGTCGTTTCGTCAGATTCCGACAAATCAGTGCTCCTCGAGCTGAAACACTCGCTCTCCGACCCTTCCGGGCTGCTCGCCACGTGGCAGGGCTCCGACCACTGCGCGTGGTCCGGCGTGCTCTGTGACTCCGCCGCGCGCCGCCGCGTCGTCGCGATCAACGTCACCGGCAACGGAGGTAACCGTAAACCCCCTTCTCCGTGCTCCGATTACGCTCAATTCCCCTTCTATGGGTTCGGAATTAGGAGGAGCTGTGACGGTTTTCGTGGCGCATTGTTCGGTAAGCTTTCTCCGAAGCTCAGTGAACTAGCGGAACTTAGGGTTTTGTCCCTTCCCTTCAATGGCCTCGAGGGAGAGATTCCCGAAGAAATTTGGGGAATGGAGAAGTTGGAGGTGCTTGATCTTGAAGGGAATTTGATAAGTGGGGTTCTACCTATTAGGTTTAATGGATTGAAAAACTTGAGGGTTCTTAATCTAGGGTTTAATAGGTTTGTTGGGGAGATTCCGAGTTCGTTGTCTAATGTTAAGAGTTTGGAGGTTTTGAATTTGGCAGGGAATGGGATTAACGGGTCTGTTTCTGGTTTTGTTGGGAGGTTGAGAGGGGTGTATTTGTCTTATAACTTGCTTGGTGGGGCAATTCCGGAGGAGATTGGGGAACATTGTGGGCAGCTGGAGCATCTTGATTTGTCTGGTAATCTTTTGATGCAGGGAATTCCGGGGAGTTTGGGGAATTGTAGTGAGTTGAGGACGGTTTTGTTGCATTCAAATATATTGGAGGATGTCATTCCTGCTGAGCTTGGGAGGCTTAGGAAGCTTGAGGTGTTGGATGTGTCGAGGAATACGCTCGGTGGGCAGGTGCCTATGGAGCTTGGGAATTGTACTGAGTTGTCTGTGCTGCTTTTGTCTAATCTTTTTAGTTCAGTTCCGGATGTTAATGGTACTTTGGGGGACTCGGGGGTGGAGCAGATGGTTGCTATGAATATTGATGAGTTTAATTACTTTGAAGGTCCGGTTCCTGTTGAGATTATGAACCTTCCTAAGCTGAGACTGCTGTGGGCGCCTAGGGCGAATCTGGAAGGCAGTTTTATGAGCAGTTGGGGCAAGTGTGATAGCTTGGAGATGCTAAATTTGGCTCAAAATGATTTCACTGGGGATTTTCCTAATCAGCTTGGTGGCTGCAAGAATCTCCATTTTCTTGATTTGAGTGCAAATAACCTTACTGGTGTGCTAGCGGAAGAACTTCCTGTCCCTTGTATGACTGTGTTTGATGTTAGTGGGAATGTCTTATCTGGCCCAATTCCTCAATTCTCTGTTGGCAAGTGTGCTTCAGTTCCTTCCTGGAGTGGAAATCTGTTTGAAACAGACGACAGAGCGCTTCCGTACAAATCCTTTTTTGCATCTAAGATTCTTGGGGGGCCCATTTTGGCTTCACTAGGAGAAGTTGGCCGTTCCGTTTTTCACAACTTTGGTCAAAACAACTTTGTTAGCATGGAGTCATTGCCAATAGCACGTGACAAGCTGGGGAAGGGGTTGGTTTATGCAATTCTTGTGGGAGAAAACAAGTTGGCGGGACCTTTTCCTACTAATTTATTCGAGAAATGTGATGGGTTAAATGCATTGCTTTTAAATGTAAGTTATAATATGCTATCCGGTCAGATTCCTTCCAAGTTTGGCAGAATGTGCAGATCATTGAAATTCTTGGATGCATCAGGTAATCAGATTACTGGGCCAATTCCCGTAGGTTTGGGGGATATGGTCTCTCTTGTTTCTCTGAATCTAAGTCGGAACCGTTTACAAGGTCAGATTCTCGTCAGCATTGGCCAGTTGAAGCATCTGAAATTTCTCTCTTTGGCTGATAATAACATAGGTGGTTCCATCCCTACCAGCCTGGGGCGGTTGTACTCTTTAGAAGTCCTAGACCTTTCTTCAAATTCTCTTACAGGTGAAATTCCCAAAGGTATTGAGAACTTGAGAAACCTGACTGATGTTTTGCTTAACAATAACAAACTTTCTGGACAGATTCCTGCTGGTTTGGCAAATGTCAGTACACTGTCAGCATTTAATGTATCTTTCAATAACTTATCTGGATCTTTTCCTTCAAATGGTAACTCAATAAAATGCAGCAATGCTGTGGGGAATCCATTTTTACGTTCTTGCAATGAAGTTTCTCTTGCCGTGCCATCTGCTGACCAAGGGCAGGTTGATAATTCTAGTTCTTACACTGCTGCACCACCAGAAGTTACAGGCAAAAAGGGAGGGAATGGTTTCAATTCTATTGAAATAGCATCTATAACATCTGCATCAGCCATTGTTTCTGTGCTTCTAGCCCTAATCGTCCTTTTTATTTATACACAGAAGTGGAACCCTAGGTCCAGGGTTGTTGGGTCTATGAGAAAAGAAGTTACAGTGTTCACTGATATTGGGGTTCCATTGACATTTGAAAATGTTGTTCGAGCCACAGGAAATTTCAATGCTAGCAACTGCATTGGGAATGGGGGATTTGGAGCAACCTACAAGGCAGAGATAGTACCAGGAAACTTGGTGGCAATAAAACGTCTGGCAGTTGGACGATTCCAAGGTGTTCAACAATTCCATGCAGAGATTAAGACCCTTGGAAGGCTTCGTCATCCAAATCTTGTCACTCTGATTGGTTATCATGCCAGCGAGACTGAGATGTTTCTCATATACAACTATTTGCCAGGTGGCAATCTGGAAAAGTTTATCCAAGAGAGATCCACAAGGGCAGTGGATTGGAGGATTCTTCACAAGATTGCATTGGATATAGCCCGTGCACTTGCATACCTGCATGATCAGTGTGTACCCCGAGTTCTACATCGGGATGTCAAGCCCAGTAATATCTTGCTGGATGATGATTATAATGCTTATCTATCTGACTTTGGATTGGCTAGACTTCTGGGAACCTCAGAAACTCATGCTACCACTGGTGTAGCAGGGACCTTTGGCTATGTAGCTCCTGAATATGCCATGACTTGTCGTGTTTCCGACAAGGCTGATGTGTATAGCTATGGTGTGGTGCTTCTGGAGTTACTCTCTGACAAGAAGGCATTGGATCCTTCATTTTCGTCATATGGGAATGGTTTCAACATAGTAGCATGGGCATGCATGCTACTGCGACAAGGCCAGGCAAAAGAGTTCTTTGCCGCCGGCTTATGGGATGCAGGACCTGAAGATGATTTGGTAGAGGTCCTACACCTGGCTGTTGTGTGTACGGTTGACTCTCTCTCAACCAGACCTTCAATGAAACATGTTGTACGGCGGCTTAAGCAACTTCAACCGCCATCATGCTAG | 3411 | 0.4571 | MFSSSSVIKWRFHHKPMTLVRLFTLASLLMLSLNDVVSSDSDKSVLLELKHSLSDPSGLLATWQGSDHCAWSGVLCDSAARRRVVAINVTGNGGNRKPPSPCSDYAQFPFYGFGIRRSCDGFRGALFGKLSPKLSELAELRVLSLPFNGLEGEIPEEIWGMEKLEVLDLEGNLISGVLPIRFNGLKNLRVLNLGFNRFVGEIPSSLSNVKSLEVLNLAGNGINGSVSGFVGRLRGVYLSYNLLGGAIPEEIGEHCGQLEHLDLSGNLLMQGIPGSLGNCSELRTVLLHSNILEDVIPAELGRLRKLEVLDVSRNTLGGQVPMELGNCTELSVLLLSNLFSSVPDVNGTLGDSGVEQMVAMNIDEFNYFEGPVPVEIMNLPKLRLLWAPRANLEGSFMSSWGKCDSLEMLNLAQNDFTGDFPNQLGGCKNLHFLDLSANNLTGVLAEELPVPCMTVFDVSGNVLSGPIPQFSVGKCASVPSWSGNLFETDDRALPYKSFFASKILGGPILASLGEVGRSVFHNFGQNNFVSMESLPIARDKLGKGLVYAILVGENKLAGPFPTNLFEKCDGLNALLLNVSYNMLSGQIPSKFGRMCRSLKFLDASGNQITGPIPVGLGDMVSLVSLNLSRNRLQGQILVSIGQLKHLKFLSLADNNIGGSIPTSLGRLYSLEVLDLSSNSLTGEIPKGIENLRNLTDVLLNNNKLSGQIPAGLANVSTLSAFNVSFNNLSGSFPSNGNSIKCSNAVGNPFLRSCNEVSLAVPSADQGQVDNSSSYTAAPPEVTGKKGGNGFNSIEIASITSASAIVSVLLALIVLFIYTQKWNPRSRVVGSMRKEVTVFTDIGVPLTFENVVRATGNFNASNCIGNGGFGATYKAEIVPGNLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDYNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACMLLRQGQAKEFFAAGLWDAGPEDDLVEVLHLAVVCTVDSLSTRPSMKHVVRRLKQLQPPSC* | 1137 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso8g2030 | 1136 | SMART | LRR_typ_2 | 230 | 254 | IPR003591 | - | |
Gso8g2030 | 1136 | SMART | LRR_typ_2 | 303 | 327 | IPR003591 | - | |
Gso8g2030 | 1136 | SMART | LRR_typ_2 | 691 | 714 | IPR003591 | - | |
Gso8g2030 | 1136 | SMART | LRR_typ_2 | 619 | 643 | IPR003591 | - | |
Gso8g2030 | 1136 | SMART | LRR_typ_2 | 161 | 184 | IPR003591 | - | |
Gso8g2030 | 1136 | SMART | LRR_typ_2 | 667 | 690 | IPR003591 | - | |
Gso8g2030 | 1136 | SMART | LRR_typ_2 | 185 | 209 | IPR003591 | - | |
Gso8g2030 | 1136 | SMART | LRR_typ_2 | 255 | 279 | IPR003591 | - | |
Gso8g2030 | 1136 | SUPERFAMILY | L domain-like | 366 | 751 | - | - | |
Gso8g2030 | 1136 | SMART | serkin_6 | 857 | 1109 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso8g2030 | 1136 | Gene3D | Ribonuclease Inhibitor | 233 | 354 | IPR032675 | - | |
Gso8g2030 | 1136 | Gene3D | Ribonuclease Inhibitor | 355 | 542 | IPR032675 | - | |
Gso8g2030 | 1136 | Gene3D | Ribonuclease Inhibitor | 543 | 636 | IPR032675 | - | |
Gso8g2030 | 1136 | Pfam | Leucine Rich Repeat | 257 | 279 | IPR001611 | GO:0005515 | |
Gso8g2030 | 1136 | Pfam | Protein kinase domain | 860 | 1058 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso8g2030 | 1136 | Pfam | Leucine rich repeat | 163 | 222 | IPR001611 | GO:0005515 | |
Gso8g2030 | 1136 | Pfam | Leucine rich repeat | 645 | 704 | IPR001611 | GO:0005515 | |
Gso8g2030 | 1136 | SUPERFAMILY | Protein kinase-like (PK-like) | 841 | 1128 | IPR011009 | - | |
Gso8g2030 | 1136 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 | 16 | 1135 | - | - | |
Gso8g2030 | 1136 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 16 | 1135 | - | - | |
Gso8g2030 | 1136 | SUPERFAMILY | L domain-like | 40 | 338 | - | - | |
Gso8g2030 | 1136 | ProSiteProfiles | Protein kinase domain profile. | 857 | 1131 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso8g2030 | 1136 | PRINTS | Leucine-rich repeat signature | 430 | 443 | - | - | |
Gso8g2030 | 1136 | PRINTS | Leucine-rich repeat signature | 667 | 680 | - | - | |
Gso8g2030 | 1136 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 977 | 989 | IPR008271 | GO:0004672|GO:0006468 | |
Gso8g2030 | 1136 | ProSitePatterns | Protein kinases ATP-binding region signature. | 863 | 885 | IPR017441 | GO:0005524 | |
Gso8g2030 | 1136 | Gene3D | Ribonuclease Inhibitor | 38 | 232 | IPR032675 | - | |
Gso8g2030 | 1136 | Gene3D | Phosphorylase Kinase; domain 1 | 820 | 932 | - | - | |
Gso8g2030 | 1136 | Gene3D | Transferase(Phosphotransferase) domain 1 | 933 | 1133 | - | - | |
Gso8g2030 | 1136 | Gene3D | Ribonuclease Inhibitor | 637 | 755 | IPR032675 | - | |
Gso8g2030 | 1136 | Pfam | Leucine rich repeat N-terminal domain | 40 | 77 | IPR013210 | - | |
Gso8g2030 | 1136 | CDD | STKc_IRAK | 863 | 1131 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso8g2030 | Gso-Chr8 | 21331156 | 21335286 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso8g2030 | 36 | 1136 | Receptor kinase-like Gene Family | AT3G02130 | 63.417 | 0.0 | 1330 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XV | Gso8g2030 | Pkinase | 1.7e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso8g2030 | - | - | gmx:100803891 | 2186.38 |