Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2025 ATGAAGCAAAGACAGATCTTTGCTCGAGTGGTGATTTTGTTGCTCATGTTCTTAGTTGGAGCCAGGTTTGCTAAAGCAAAAGAAGGAGGAGAAGAAGCTGCTGATAGGATTTTGAAACTCCCTGGTCAGCCAAAAGTATCATTTAAGCAATTTTCTGGCTATGTTACTGTCAACAAGGTTGCTGGTAGAGCTCTCTTTTACTGGCTCGCTGAAGCTGCCCAAAATCCTCTCACCAAACCTTTGGTCATTTGGCTTAATGGAGGTCCAGGATGTTCATCAGTGGCATATGGAGCATCTGAAGAGATTGGCCCATTTAGAATAAACAAAACAGCTTCTGGTCTATACAAAAACAAGTTCTCATGGAACTCAGTGGCCAACCTCTTGTTCTTGGAAGCTCCGGCCGGCGTCGGCTTCTCCTATACCAACCGCTCCTCCGACCTCCTCGACACCGGTGACCGCCGCACCGCTCAAGATTCTCTGGAATTTGTTATCCAATGGCTAGAACGATTCCCTCGTTACAAAACTCGGGAGCTCTATATCACTGGAGAGAGCTATGCAGGTCATTATGTTCCTCAATTAGCCAAGGAAATCATGACCTACAATGCAAAAACCAAGCACCCCATCAATCTCAAAGGAATCATGGTAGGAAATGCAGTGACAGACAACTACTATGATAACTTGGGCACAGTGACGTATTGGTGGAGCCATGCTATGATCTCCGACCAGACTTTCCGGCAACTAATGAGTAGATGTGATTTTCACAGGCAGAAGGAATCTGATGAGTGTGAGTCTGTGTATAGCTATGCCATGGATCAAGAGTTTGGTAACATTGATCAGTACAACATCTATGCTCCTCCATGCAACAACTCTGATGGTAGTAGTAGTGGTAGTGGCTCTGCCACCCGCCGCACCATGCGGTTACCTCACCGACCCCATGTGGCTTTTAGGCATTGGTCTGGTTATGATCCATGTACGGAAAAGTATGCCGAGATTTACTACAACAGGCCTGATGTTCAGAAAGCACTCCATGCTAACAAAACTGGCATTCCATATAGGTGGACTGCTTGCAGTGAGGTTTTGAATCGGAACTGGAATGATACAGATGTATCTGTTCTTCCAATTTATAGAGAGTTGATAGCTCACGGAATAAGAGTTTGGGTGTTCAGTGGGGACGTGGACTCAGTGGTGCCTGTCACAGCAACAAGATATGCCCTTGCACAGCTTAAGTTGTCAACTAAAATACCATGGTATCCTTGGTATGTCAAAAACCAGGTTGGAGGGTGGACAGAGGTGTACGAAGGGGTAACATTCGCGACAGTGAGAGGAGCAGGTCATGAAGTGCCACTATTCAAGCCAAGAGCAGCCCTTCAGTTATTCACATCATTCCTTACAGGAAAGCCTCTTCCAAAGTCCTAG 1416 0.4605 MKQRQIFARVVILLLMFLVGARFAKAKEGGEEAADRILKLPGQPKVSFKQFSGYVTVNKVAGRALFYWLAEAAQNPLTKPLVIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYKNKFSWNSVANLLFLEAPAGVGFSYTNRSSDLLDTGDRRTAQDSLEFVIQWLERFPRYKTRELYITGESYAGHYVPQLAKEIMTYNAKTKHPINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTFRQLMSRCDFHRQKESDECESVYSYAMDQEFGNIDQYNIYAPPCNNSDGSSSGSGSATRRTMRLPHRPHVAFRHWSGYDPCTEKYAEIYYNRPDVQKALHANKTGIPYRWTACSEVLNRNWNDTDVSVLPIYRELIAHGIRVWVFSGDVDSVVPVTATRYALAQLKLSTKIPWYPWYVKNQVGGWTEVYEGVTFATVRGAGHEVPLFKPRAALQLFTSFLTGKPLPKS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2025 471 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 25 11 470 - -
Gso8g2025 471 Gene3D alpha/beta hydrolase 32 289 IPR029058 -
Gso8g2025 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 470 IPR001563 GO:0004185|GO:0006508
Gso8g2025 471 ProSitePatterns Serine carboxypeptidases, histidine active site. 435 452 IPR033124 GO:0004185
Gso8g2025 471 Pfam Serine carboxypeptidase 42 464 IPR001563 GO:0004185|GO:0006508
Gso8g2025 471 Gene3D - 324 361 - -
Gso8g2025 471 SUPERFAMILY alpha/beta-Hydrolases 33 469 IPR029058 -
Gso8g2025 471 Gene3D - 371 465 - -
Gso8g2025 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Gso8g2025 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Gso8g2025 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Gso8g2025 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Gso8g2025 471 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2025 Gso-Chr8 21231609 21238590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2025 329 468 Calmodulin-binding Proteins AT2G22960 31.206 2.65e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2025 K16297 - gmx:100799618 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2177 18 54775412 54782493 Gso8g2025 8 21231609 21238590 GST