Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2024 ATGGCTGTAGAGGAGTCTGAGCCTGTGATTGGGGAGCTGGAAAGGGAGGAGAATTTGATTGCTGCGGTAAGGCATATTGTGAAGGCACTGGGGCCAAATAAGACCCTTACTAGTGATGCCAAGAAAATTCTGGCAGATCTTAGCACTAGATTGTCCTCCATGTCCATACCTAGTGAGAAGGAGGAGGGGAAACAAGGGCAAGGGGAGGATGATGGTGATAATCATGATGGCGGTGGTGATCTTTATGATGAGGATGATGATGATGATGAGGGTATTAGTGCTATTGAAGAAAAGCTTAATGTGATTCAGGAGAAAATTATGAGATGGGAGGAAGATCAGTCCATGATTTGGGATTTGGGACCTGAGGAAGCATCTGAGTATCTGAATGCTGCTAACGAAGCCCGCCGGTTGATTGAGAAGTTGGAAAGTTTGAATTTGAAGAAAGAGGATCAAGAGTACAAGTTTATGCAGAGGGCGTATAGTGTTCTTCAAACAGCTATGGCACGGCTTGAAGAAGAATTCAGGAACTTGCTTATCCAGAACAGGCAACCTTTTGAGCCTGAGTATGTCTCTATTCGCTCCAGCGAGGAAGATGCTGTTGATGAGAACTCCATAGTCTCTTTAGGTGATGAATCAGTTGAGGAATCACTTCAAAGAGATAGTGTCAGCAGAGCTTCTGAGGAGCATATCATTTATTTGGTTCATCCAGCCGTGATCCCGGATCTCAGGTGTATTGCAAACTTGCTTTTTGCTTCTAATTATGTTCAGGAATGTTCCAATGCTTATATTATTGTCCGGAGGGATGCCTTAGATGAGTGCCTCTTCATTCTTGAAATGGAAAGGCTCAGCATCGAGGACGTCTTGAAAATGGAGTGGGGTACTCTGAACTCAAAAATCAAAAGATGGATTTGGGCTGTGAAAATTTTTGTTAGGGTTTATCTTGCAAGTGAGAGGTGGCTCAGTGACCAGCTTTTTGGGGAGGGTGAGCCTGTTGGTCTATCTTGTTTTGTCGATGCATCTAAGGCTTCGATATTGCAGCTTCTGAATTTTGGTGAAGCCATGTCCATTGGGCCTCACCAACCTGAGAAATTGTTTCGTGTTCTTGACATGTATGAGGTTCTACAAGACCTTATGCCAGACATTGATGCTTTGTATTCAGTTGAGGTTGGTTCCTCGGTTAAAATTGAATGTCATGAGGTTCTGAAGAGACTAGGTGATTGTGTGAGGGTGACATTTCTTGAATTTGAAAATGCCATTGCAACAAATGTATCATCAACTCCTTTTGTAGGTGGTGGGATACATCCTTTGACCAAATATGTTATGAATTATCTTAGAACCCTTACTGACTACAGTGACATACTCAATCTGCTTCTGAAGGACCAAGACGAGGATGCCATTTCGCTGTCACCTGACATGAGCCCTGGTACAGAGGAAGATAGCAGAAGCCAGGGATCTCCAGGTAGAGTTTCCTCAATGGCCCTTCACTTCCGATCAATTGCTTCAATCTTGGAAAGCAACCTCGAGGAGAAGTCCAAGTTATACAAAGAAGTCTCCTTGCAGCACTTGTTCTTAATGAACAACCTGCATTATATGGCTGAAAAGGTTAAGGGGTCTGAACTCAGGCTCATACATGGAGATGAATGGATTCGAAAGTGCAACTGGAAGTTTCAGCAGCATGCAATGAAATATGAGAGAGCTAGTTGGAATCCCATTCTCAACTTGCTTAAGGATGAGGGAATTCATGTTCCGGGTACAAATTCGGTCTCAAAAAGTCTTCTTAAAGAGAGGCTACAAAGCTTCTTCCTTGGCTTTGAGGATGTTTACAGGATCCAGACAGCTTGGATTATCCCAGATATTCAGCTTCGTGAAGATTTGCGGATTTCTATATCCGTCAAAGTAATCCAAGCTTATAGGACGTTTGTCGGAAGGCACATTAGTCACATGGGTTACAAAATCATTAAGTACACTGTTGAAGAGTTAGAAAACTACCTTTTCGATTTCTTTGAAGGATCTCAAAAGTGGTTGCAAAATCCTCATAGGAGGTGA 2046 0.4291 MAVEESEPVIGELEREENLIAAVRHIVKALGPNKTLTSDAKKILADLSTRLSSMSIPSEKEEGKQGQGEDDGDNHDGGGDLYDEDDDDDEGISAIEEKLNVIQEKIMRWEEDQSMIWDLGPEEASEYLNAANEARRLIEKLESLNLKKEDQEYKFMQRAYSVLQTAMARLEEEFRNLLIQNRQPFEPEYVSIRSSEEDAVDENSIVSLGDESVEESLQRDSVSRASEEHIIYLVHPAVIPDLRCIANLLFASNYVQECSNAYIIVRRDALDECLFILEMERLSIEDVLKMEWGTLNSKIKRWIWAVKIFVRVYLASERWLSDQLFGEGEPVGLSCFVDASKASILQLLNFGEAMSIGPHQPEKLFRVLDMYEVLQDLMPDIDALYSVEVGSSVKIECHEVLKRLGDCVRVTFLEFENAIATNVSSTPFVGGGIHPLTKYVMNYLRTLTDYSDILNLLLKDQDEDAISLSPDMSPGTEEDSRSQGSPGRVSSMALHFRSIASILESNLEEKSKLYKEVSLQHLFLMNNLHYMAEKVKGSELRLIHGDEWIRKCNWKFQQHAMKYERASWNPILNLLKDEGIHVPGTNSVSKSLLKERLQSFFLGFEDVYRIQTAWIIPDIQLREDLRISISVKVIQAYRTFVGRHISHMGYKIIKYTVEELENYLFDFFEGSQKWLQNPHRR* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2024 681 Pfam Exo70 exocyst complex subunit 300 664 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso8g2024 681 Coils Coil 124 180 - -
Gso8g2024 681 PANTHER EXOCYST COMPLEX PROTEIN EXO70 22 675 IPR004140 GO:0000145|GO:0006887
Gso8g2024 681 MobiDBLite consensus disorder prediction 51 88 - -
Gso8g2024 681 Coils Coil 92 112 - -
Gso8g2024 681 Gene3D Exocyst complex component Exo70 105 676 - -
Gso8g2024 681 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 22 675 - -
Gso8g2024 681 MobiDBLite consensus disorder prediction 473 488 - -
Gso8g2024 681 SUPERFAMILY Cullin repeat-like 112 669 IPR016159 -
Gso8g2024 681 MobiDBLite consensus disorder prediction 467 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2024 Gso-Chr8 21224409 21227333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2024 12 681 EXO70 exocyst subunit family AT3G29400 48.392 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2024 K07195 - gmx:100799102 1258.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2176 18 54766247 54769108 Gso8g2024 8 21224409 21227333 GST