Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1995 ATGCCCAACACCTCCTCTCTCCTTCGGTGGATTAGCAAAAAGTTGCGACCAAGGAATTCAATTAGCAATGGAGATAGCAGCAGCGACACCTTTCACAACGGTAACGGTGTCAGTACTGACACCGTTGTTGTGGATGACAATCCATTTAGCAGCGGGGTGGAGTGTTACGCCTGCACGCAGGTAGGCGTGCCGGTGTTTCACTCCACCAGCTGCGACAGTGCCTACCATCAGCTGCAGTGGGAGGCTTCTGCTGGATCGTCTCTGGTTCCAATCCAGAGCCGGCCCAAAAAGGTCCTCGGCTTCCGGACCGTGTCTGGTTTGACACGGGGGCCGTTCGGGCGGGTTCTGGATCCGCGGAGCAAGCGAGTGCAGAGGTGGAACCGCGCGCTGCTGCTGGCGCGTGGGGTGGCGCTGGCGATAGACCCGCTGTTCTTCTATTCGCTGTCGATAGGGAGGGAGGGGTCGCCGTGTTTGTACATGGACGGAGGGCTGGCGGCGATGGTGACGGTGGCGCGGACGTGCGTGGACGCGGTGCACCTCTTGCACGTGTGGCTGCAGTTCAGGCTGGCGTACGTGTCGCGGGAGTCGCTGGTGGTGGGGTGCGGGAAACTCGTGTGGGACGCGCGTGACATCGCGTCTCATTACCTGAGATCGTTGAAGGGGTTCTGGTTCGACGCATTCGTGATCCTCCCAGTTCCCCAGGTTGTGTTTTGGCTGATAGTGCCAAAATTGCTACGAGAAGAGAAAATTAAAATCATTATGACAATAATGCTATTGATTTTTTTGTTCCAATTTCTCCCCAAGGTTTACCATAGCATCTGCATGATGAGACGAATGCAAAAAGTCACAGGCTACATCTTTGGCACTATTTGGTGGGGCTTTGGTCTCAATCTCATAGCTTATTTTATTGCTTCTCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCAATTCAACGTGTTGCATCCTGCCTCCGGCAGCAGTGTGAGAGAACTAATGGATGCAATCTTTCTGTGTCATGCTCAGAGGAGATATGCTACCAGTCTTTGTTACCAGCTAGCGCGATAGCAGATTCATGTGGTGGAAACTCAACAGTGGTAAGAAAGCCTTTGTGCTTAGATGTTCAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTCCTGTCATATCCAGCAACTCTTTGGCTGTAAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCACTTTCGGAAATGATCTTGAACCCACAAGCAACTGGCTAGAAGTGATTTTCAGTATATGCATAGTACTCAGTGGACTATTGCTTTTCACATTATTGATTGGTAACATTCAGGTATTCTTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGCTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCATCGCGATTAAGACAAAGAGTTCGCCATTTTGAACGTCAAAGATGGGCAGCGATGGGAGGAGAAGATGAGATGGAAATGATCAAAGACTTGCCGGAGGGGCTGAGGAGGGACATCAAGCGCCATCTTTGCCTCGACCTCATTAGAAAGGTTCCTCTATTCCACAACATGGATGATCTTATTCTTGACAACATCTGTGACAGGGTGAAGCCCCTAGTCTTCTCTAAAGACGAAAAGATAATCAGAGAAGGTGATCCTGTACCAAGGATGGTGTTCGTTGTCCGAGGGCGCATAAAACGCAACCAAAGCCTTAGCAAAGGCATGGTAGCCTCAAGCATCCTTGATCCCGGAGGGTTTTTGGGTGACGAGCTACTTTCATGGTGCCTTCGTCGGCCGTTTATCGACAGACTTCCGGCCTCCTCCGCCACATTTGTATGTCTTGAATCAGCAGAAGCCTTTGGCCTTGATGCCAATAACTTGAGGTACATCACTGATCACTTCCGGTACAAATTTGCAAATGAGAGGCTGAAAAGAACAGCAAGATATTACTCATCCAATTGGAGAACTTGGGCTGCTGTCAACATTCAATTTGCTTGGAGACGTTACAGGCAGAGGACTAAAGGTCCTGTGATCCCTGTAAGGGACACTAATGGAGGCACTGAACGCAGGCTCTTGCAATATGCTGCATTGTTCATGTCATTAAGGCCACATGACCACCTTGAATGA 2157 0.4988 MPNTSSLLRWISKKLRPRNSISNGDSSSDTFHNGNGVSTDTVVVDDNPFSSGVECYACTQVGVPVFHSTSCDSAYHQLQWEASAGSSLVPIQSRPKKVLGFRTVSGLTRGPFGRVLDPRSKRVQRWNRALLLARGVALAIDPLFFYSLSIGREGSPCLYMDGGLAAMVTVARTCVDAVHLLHVWLQFRLAYVSRESLVVGCGKLVWDARDIASHYLRSLKGFWFDAFVILPVPQVVFWLIVPKLLREEKIKIIMTIMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERTNGCNLSVSCSEEICYQSLLPASAIADSCGGNSTVVRKPLCLDVQGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMEMIKDLPEGLRRDIKRHLCLDLIRKVPLFHNMDDLILDNICDRVKPLVFSKDEKIIREGDPVPRMVFVVRGRIKRNQSLSKGMVASSILDPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESAEAFGLDANNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTKGPVIPVRDTNGGTERRLLQYAALFMSLRPHDHLE* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1995 718 CDD CAP_ED 530 640 IPR000595 -
Gso8g1995 718 Gene3D - 157 453 - -
Gso8g1995 718 Pfam Ion transport protein 126 448 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso8g1995 718 Gene3D Jelly Rolls 528 646 IPR014710 -
Gso8g1995 718 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 58 718 - -
Gso8g1995 718 Gene3D Helix hairpin bin 456 521 - -
Gso8g1995 718 SUPERFAMILY Voltage-gated potassium channels 117 451 - -
Gso8g1995 718 ProSiteProfiles cAMP/cGMP binding motif profile. 530 640 IPR000595 -
Gso8g1995 718 SUPERFAMILY cAMP-binding domain-like 457 644 IPR018490 -
Gso8g1995 718 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 58 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1995 Gso-Chr8 20646152 20651648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1995 46 718 Ion Channels AT5G15410 78.540 0.0 1046
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2151 18 54578360 54584207 Gso8g1995 8 20646152 20651648 GST