Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1985 ATGGATGCAGCAGCTGGCCAGGGTTATTGTGGTGGTGCAGACCTGGACATGTTTCTAACGAATTATAAATTGGGAAAAACTTTTGGCATTGGATCCATGGACAAGGTGAAAATTGCAGAACATGTATTGACTGGCCAGAAGGTTGCCATCAAGATCCTTAACCGTCGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAAAAGAGAAATCAAAATTTTAAGATTGCTCGTGCATCCTCACATTATACAACTTTATGAGATCATAGAGACCCCGATTGACATCTATATTGTTATGGAGTATGCAAAATCAGGAGAGCTCTTTGATTACATAGTAGAAAAAGGTAGGTTACAAGAAGATGAAGCTCGTAATATTTTTCAGCAGATAATCTCTGGTGTGGAGTATTGTCACAGCAACATGGTGGTTCATAGAGATTTGAGGCCTGAGAAAGTACTCTTGGACTCCAAATGTAATGTCAAGATTGCTGGATTTGGCTGGAGCAACATCATTCGCGATGGTCACTTTCTTAAGACACGTTGTGGAAGTAGTAACTATGCAGCTCCTGAGGTTATCTCTGGGAAATTATATGTTGGACCAAAAGTTGATGTCTGGAGTTGTGGTGTAATTTTATATTTTCTTCTTTGTGGTTCTTTTCCTTTTGACGATGAAAACATCCCAAATCTCTTCAACAAAATAAAGGGTGGGATTTTCACTCTTCCTTGCCATCTATCTCCTGGAGCCAGTGATTTGATACCAAAGATGCTCATGGTTGACCCCGTGAAGAGGATGACCATACCTGAGATCTGTCAACACCCATGGTTCCAAAGTTGA 831 0.4019 MDAAAGQGYCGGADLDMFLTNYKLGKTFGIGSMDKVKIAEHVLTGQKVAIKILNRRKIKNMEMEEKVKREIKILRLLVHPHIIQLYEIIETPIDIYIVMEYAKSGELFDYIVEKGRLQEDEARNIFQQIISGVEYCHSNMVVHRDLRPEKVLLDSKCNVKIAGFGWSNIIRDGHFLKTRCGSSNYAAPEVISGKLYVGPKVDVWSCGVILYFLLCGSFPFDDENIPNLFNKIKGGIFTLPCHLSPGASDLIPKMLMVDPVKRMTIPEICQHPWFQS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1985 276 ProSiteProfiles Protein kinase domain profile. 22 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1985 276 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 11 275 - -
Gso8g1985 276 Pfam Protein kinase domain 22 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1985 276 Gene3D Transferase(Phosphotransferase) domain 1 12 276 - -
Gso8g1985 276 SUPERFAMILY Protein kinase-like (PK-like) 19 275 IPR011009 -
Gso8g1985 276 CDD STKc_AMPK_alpha 21 274 - -
Gso8g1985 276 PANTHER SERINE/THREONINE KINASE 11 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1985 Gso-Chr8 20506999 20516221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1985 22 275 CBL-interacting serine-threonine protein kinases AT2G26980 47.860 7.58e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Gso8g1985 Pkinase 9.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1985 K07198 - gmx:100779991 562.762