Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1971 ATGCTTATGTCTGGCACAGAACAGGTGACCATGGGAGGATTAGGACTCAATTTGACTCCAATTACTACATTTGCTATCATTACTGTGATTGCTACGGTGCTAATATGGTGGTTTTGGAATGCACTCAACTGGGTGTGGCTGAGACCCAAGAGGATAGAGAGGCGTCTCAAGGAGCAGGGTATCCAAGGAAATTCCTACCGCCCTTTGATTGGAGACATCAGAGATATGGTTAAGATGATTAAGGAAGCCAAATCCAAACCTATGGATCCTCACTCTAATGACATTGCGCCCCGTGTGTTGCCTTACGTTGTTCACACCATCGCTAAATACGGTAAGAGTTCATTTATGTGGCTTGGTCCAACACCAAGGGTATTCATCTTGGATCCTGACAAATTCAAAGAAATGGCTACTAAGGTCTATGATTTTCAAAAGCCCGACACTAGTCCACTTTTCAAGCTTCTAGCATCAGGGTTTGCAAATTATGATGGCGACAAGTGGGCTAAACACAGAAAGATCGTGAGTCCAGCATTCAATGTAGAGAAAATGAAGCTCTTGGTACCGATATTTTGCCAGAGTTGCGATGATTTGATCAGCAAATGGGAGAGTTTGTTATCTTCGTCTAATGGGTCTTGTGAGTTAGATGTGTGGCCTTTTGTCCAAAACGTGTCAAGCGACGTTCTTGCTCGTGCAGGCTTTGGAAGTAGCTATCAAGAAGGGAAAAAAATATTCGAACTTCAAAGGGAAATGATTCAGCTTACAATGACGCTCTTTAAGTTTGCTTTCATTCCAGGTTACAGGTTTCTGCCAACGCATACCAACAGGAGGATGAAAGCAATTGACAAAGAAATACGAGAATCACTTATGGTAATCATCAACCGAAGATTAAAAGCAATCAAAGCAGGGGAGCCTACTAACAATGACTTGTTAGGCATACTCTTGGAATCAAATTACAAGGAATCTGAAAAAAGTAGTGGTGGAGGAATGAGTTTAAGGGAAGTAGTGGAAGAAGTGAAGCTATTTTACTTGGCAGGGCAGGAAGCAAATGCAGAATTGCTGGTCTGGACATTGTTGTTATTAAGCAGGCATCCAGATTGGCAAGAAAAGGCTAGGGAGGAGGTTTTCCAAGTGTTCGGGAATGAAAAGCCAGATTATGAAAGGATTGGTCAACTGAAAATTGTGTCGATGATTCTACAGGAGAGTCTCAGATTATACCCACCAGTGGTTATGTTCGCTCGGTATCTTCGTAAAGATACAAAACTTGGAGAGCTTACAATTCCCGCAGGAGTGGAGCTTGTTGTACCTGTGTCAATGCTACACCAGGATAAGGAGTTTTGGGGAGATGATGCCGGGGAATTCAACCCAGAAAGATTCTCGGAAGGAGTATCAAAGGCAACAAAAGGCAAGCTTTCCTACTTGCCATTTGGATGGGGTCCTCGACTCTGCATAGGACAAAACTTTGGCTTGTTAGAAGCAAAAGTAGCTGTGTCAATGATCCTGCAACGTTTCTCCCTCCATTTTTCCCCCTCCTATGCTCATGCCCCCTCCTTTATTATCACTCTTCAGCCTGAGCGTGGGGCTCATCTCATTTTACGCAAACTCTAG 1602 0.4345 MLMSGTEQVTMGGLGLNLTPITTFAIITVIATVLIWWFWNALNWVWLRPKRIERRLKEQGIQGNSYRPLIGDIRDMVKMIKEAKSKPMDPHSNDIAPRVLPYVVHTIAKYGKSSFMWLGPTPRVFILDPDKFKEMATKVYDFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKMKLLVPIFCQSCDDLISKWESLLSSSNGSCELDVWPFVQNVSSDVLARAGFGSSYQEGKKIFELQREMIQLTMTLFKFAFIPGYRFLPTHTNRRMKAIDKEIRESLMVIINRRLKAIKAGEPTNNDLLGILLESNYKESEKSSGGGMSLREVVEEVKLFYLAGQEANAELLVWTLLLLSRHPDWQEKAREEVFQVFGNEKPDYERIGQLKIVSMILQESLRLYPPVVMFARYLRKDTKLGELTIPAGVELVVPVSMLHQDKEFWGDDAGEFNPERFSEGVSKATKGKLSYLPFGWGPRLCIGQNFGLLEAKVAVSMILQRFSLHFSPSYAHAPSFIITLQPERGAHLILRKL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1971 533 PRINTS E-class P450 group I signature 107 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1971 533 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1971 533 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1971 533 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1971 533 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1971 533 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1971 533 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1971 533 PRINTS P450 superfamily signature 481 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1971 533 SUPERFAMILY Cytochrome P450 98 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1971 533 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 531 - -
Gso8g1971 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Gso8g1971 533 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 1 531 - -
Gso8g1971 533 Pfam Cytochrome P450 108 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso8g1971 533 Gene3D Cytochrome P450 45 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1971 Gso-Chr8 20315955 20318328 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1971 27 533 Cytochrome P450 AT3G14690 53.649 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1971 - K24179 gmx:100801959 1046.57