Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1952 ATGAGTCAAGGAAATAGGAATTATTTTTCATGTCCCATCTGCAGGAATCAACGAAGGCGTCACGATGATAATTGTGAGTTTGGGCAATACTTTCTTGGTAGATCAACAGACTTTGAGAGTGCTTGTAGGCTCTTTGGATTCGCAAACTTGGTTAGACTGATGCGTTCTGTGGAACCATCTGAAAGGCAAGCTACTGCCGATTCCATTTTAATGGAGGCAAACATTTGGGATCGTGACCCTATTAACGGTGCCTATGGTCATGTGTTTAATTTGGTTTCCCAAATCCAGTCATTTGAAAGCGAATTAGAAACTATAAATAATTGGCTGGCGCATATTCGAGATCAACAAAGGCAACCAAGTTCATTTTCCCCTAACATCCCAAACCAAAGTATCCAAGATGAAGGTTCCAACACCCCGATTCCAAGCTTGATTGGAGCAGATATCTCTACAAGGTCTTCTGAAAAAGGAGAATCAAGTATTGTTGCGCCTAAGGAGGATGCGAATATTGTTGTTAGAGAGAGAGATTCAAAAGTTGATGACAATGAGGAAGGCACTATTCCTGATAAAGAACAAGTAGATTATTTCCGTGACGACTAA 597 0.407 MSQGNRNYFSCPICRNQRRRHDDNCEFGQYFLGRSTDFESACRLFGFANLVRLMRSVEPSERQATADSILMEANIWDRDPINGAYGHVFNLVSQIQSFESELETINNWLAHIRDQQRQPSSFSPNIPNQSIQDEGSNTPIPSLIGADISTRSSEKGESSIVAPKEDANIVVRERDSKVDDNEEGTIPDKEQVDYFRDD* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1952 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25-LIKE 9 177 - -
Gso8g1952 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 177 - -
Gso8g1952 198 MobiDBLite consensus disorder prediction 116 157 - -
Gso8g1952 198 MobiDBLite consensus disorder prediction 116 198 - -
Gso8g1952 198 ProSiteProfiles LOB domain profile. 9 109 IPR004883 -
Gso8g1952 198 MobiDBLite consensus disorder prediction 167 198 - -
Gso8g1952 198 Pfam Lateral organ boundaries (LOB) domain 10 105 IPR004883 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1952 11 110 AS2 family AT3G50510 33.663 9.22e-19 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso8g1952 LOB 3.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1952 - - gmx:102660641 405.986