Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1949 ATGAAGCAGCTGCCAACGCTGCTGATGAAGTCCCTCTCACTCTCAGTGTGTTCTTTGCCAGCAGCAGCTTCCACAACCACCCTTCAACAAATTGCTCTCCATCAACCCAAAGGTGTTGCAAAGGTTGTACTTAAAAAGGGGAAGACACAACTCTTTAAGGATGGCAACCCAATGGTGTACAGTGGAGCTGTTGATAGAATAATTGGGAGGCCACCTCCCAAGACCGGGGATGTTGTTCTGGTAGCAGATGGGACTGAGAAACCAATTGGATGGGGCATGTACAACTCAGTTTCTATGTTCTGTGTTCGGCTCATGCAGCTTGAAGATGAAGCTACTAGCGATTCATCTTGTGCATTGAATATGGAGAAACTGATTGAAACAAGAATTGATGCAGCTGTTGAAATGCGTAGAAGGTTGGGTCTTCCATCAGTCCACACCAATGCATACCGTCTAATCAATAGTGAGGGTGACAGACTATCAGGATTGATAATTGACGTCTTTGGAGGTGTTGCTGTAGTAGCGTCATCTGCTGCTTGGGTTGAGAAATACAAATCAGAGATAGAGGCATGCATCAAGAAAATCAACTATATCAATCATGTAAATTGGAGGCCATCTGTTGATATTTTAAAGGAAGATGGAGTTAATGAATCTGATTTAAACAAAATGCATTCATCTACATGTCCTGAAAGAACAAAGATTGTGGAAAATGAAATTGTATACACAATTTCATTGAAGGGCCAGAAGACGGGATTCTATGCAGATCAGCGTGAGAACCGCCAGTTTATATCAAGAATTTCAGATGGTCAAAAGGTTCTTGATATTTGCTGCTATAGTGGCGGTTTTGCTCTAAATGCTGTGCGTGGAGGTGCTCTAAATGTCACCGGTATTGACACATCACCGCTAGCTTTGGAGCTTGCTAAAGAAAATGTTGTACTCAACAACATTGATCCTGGAAGAATATCCTTTTTGAGGGAAGATGCTACTGAATTTATGAAGGGTGCTCTCTTGAGAAATGAATCCTGGGATATTGTCATCATTGATCCTCCTAAACTGGCACCAACAAAAAAGGTTCTACATAGTGCTTCTGGTATGTACAGGAATTTGAATTCACTTGCTATGCAACTTACAAAAAGAGGTGGTCTTCTGATGACATGTTCCTGTTCTGGAGCTGTGACCCAAAGTGGGATATTCATGCGCATCCTTCAGGGTGCAGCATCTATGGCGGGTAGGAGAATCACTGTCCTCAGACAGGCTGGAGCAGCTTGTGATCACCCTATCGATCCATCATACCCAGAAGGAGCATATCTAACCAACATTCTATTGCGAGTTTCATGA 1335 0.4285 MKQLPTLLMKSLSLSVCSLPAAASTTTLQQIALHQPKGVAKVVLKKGKTQLFKDGNPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGMYNSVSMFCVRLMQLEDEATSDSSCALNMEKLIETRIDAAVEMRRRLGLPSVHTNAYRLINSEGDRLSGLIIDVFGGVAVVASSAAWVEKYKSEIEACIKKINYINHVNWRPSVDILKEDGVNESDLNKMHSSTCPERTKIVENEIVYTISLKGQKTGFYADQRENRQFISRISDGQKVLDICCYSGGFALNAVRGGALNVTGIDTSPLALELAKENVVLNNIDPGRISFLREDATEFMKGALLRNESWDIVIIDPPKLAPTKKVLHSASGMYRNLNSLAMQLTKRGGLLMTCSCSGAVTQSGIFMRILQGAASMAGRRITVLRQAGAACDHPIDPSYPEGAYLTNILLRVS* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1949 444 Gene3D RNA methyltransferase domain (HRMD) like 121 224 - -
Gso8g1949 444 Pfam S-adenosylmethionine-dependent methyltransferase 225 405 IPR019614 GO:0008168
Gso8g1949 444 PANTHER RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE 23 443 - -
Gso8g1949 444 CDD AdoMet_MTases 270 385 - -
Gso8g1949 444 CDD RlmI_M_like 124 213 - -
Gso8g1949 444 SUPERFAMILY PUA domain-like 41 109 IPR015947 -
Gso8g1949 444 Gene3D Vaccinia Virus protein VP39 231 444 IPR029063 -
Gso8g1949 444 Gene3D PUA domain 39 110 IPR036974 GO:0003723
Gso8g1949 444 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 439 IPR029063 -
Gso8g1949 444 Pfam PUA-like domain 42 105 IPR041532 -
Gso8g1949 444 SMART pua_5 40 134 IPR002478 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1949 - - gmx:100796633 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1949 8 19690589 19720787 Gso8g1949 8 19690589 19720787 ECH