Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1942 ATGGCGAAAAAAGCCGTTTTGATCGGAATAAATTACCCGGGCACGAAGGCGGAGCTGAAAGGATGCATAAACGACGTGAGGAGGATGCAACGCTGCCTCATCGATCGATACGGTTTCTCCGAAGACGACATCACCGTTTTGATCGACACGGACGAGTCCTACACGGAGCCCACGGGGAAGAACATCCGGTCAGCGTTGACCAGGCTGGTCCGATCGGCGAAGCCAGGGGACATTCTGTTCGTCCATTACAGCGGACACGGCACGCGCCTCCCCGCGGAAACCGGAGAGGATGATGACACTGGCTTTGATGAATGCATTGTTCCGTCTGACATGAACCTCATCACTGATGATGATTTCAGGGAATTTGTTGATGGGTTGCCTAGAGGTTGCACGATCACAATTGTGTCTGATTCTTGCCACAGTGGTGGCCTACTTGAAGAAGCTAAGGAGCAGATAGGAGAGAGCACAAAGGGAGAGGAGGAACAATCTGGCTCTGGCTTTGGATTTTCAAGTTTTCTACACCGGACCGTGGAAGATGCCATCGAGTCTCGCGGATTCCATATCCCTTCAGCATTGCGCCACAACAGAGGCAGGGATGATGATGTTGATGAAGCTCAAGATAGGGAAATTGAACTTCCAAATGGGGGCTATGTAAAGAATAGGTCTTTGCCCCTTTCAACCCTGATTGATATACTCAAGCAGAAAACTGGAAAAGATGATATAGATGTTGGGAAACTGAGACCTACACTCTTTGATGTTTTTGGAGAAGATGCTAGTCCTAAAGTGAAGAAGTTCATGAATGTTATTTTTAACAAACTCCAACATGGAAGTGGTGAAAGTGGGGGTGGAATATTGGGGTTGGTAGGTGGTCTTGCACAAGAGTTTCTCAAGCAAAAGCTTGATGACAATGATGAGGGATATGCAAAGCCTGCATTGGAGACAAAAGTGGAAAGTAAGCAAGAGGCATATGCTGGACCAACCAAACGTGGCCTTCCGGATGGTGGGATATTGATGAGTGGATGTCAGACCGACCAAACTTCTGCCGATGCAAGTCCTGCAGGAAGCGCTGCCAGTGCTTATGGAGCTTTTAGCAATGCAATACAGGCTATAATTGAGGAGACTGATGGTGCAATCACAAACCAAGAACTTGTTCAAAGGGCAAGAGAGAAGCTGAAGAACTCCGGTTTCACTCAAAAACCGGGACTCTATTGCAGTGATCATCATGTTGATGCTCCTTTTGTGTGTTGA 1248 0.4776 MAKKAVLIGINYPGTKAELKGCINDVRRMQRCLIDRYGFSEDDITVLIDTDESYTEPTGKNIRSALTRLVRSAKPGDILFVHYSGHGTRLPAETGEDDDTGFDECIVPSDMNLITDDDFREFVDGLPRGCTITIVSDSCHSGGLLEEAKEQIGESTKGEEEQSGSGFGFSSFLHRTVEDAIESRGFHIPSALRHNRGRDDDVDEAQDREIELPNGGYVKNRSLPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMNVIFNKLQHGSGESGGGILGLVGGLAQEFLKQKLDDNDEGYAKPALETKVESKQEAYAGPTKRGLPDGGILMSGCQTDQTSADASPAGSAASAYGAFSNAIQAIIEETDGAITNQELVQRAREKLKNSGFTQKPGLYCSDHHVDAPFVC* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1942 415 PANTHER METACASPASE-5 1 415 - -
Gso8g1942 415 SUPERFAMILY Caspase-like 6 118 IPR029030 -
Gso8g1942 415 PANTHER METACASPASE-4 1 415 - -
Gso8g1942 415 Pfam Caspase domain 3 408 - -
Gso8g1942 415 Gene3D - 304 414 - -
Gso8g1942 415 Gene3D - 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1942 Gso-Chr8 19437021 19440444 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1942 - - gmx:100795043 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1942 8 19437021 19440444 Gso8g1942 8 19437021 19440444 ECH