Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1930 ATGGGGATGGACATGGCCATCAAAGCCCTTGTTAGGAGCATCCCAACTGAGGAATTTGCACAAAGGAGAAACTCTTGGAGCTTCTGGGTCTCCTCTCCCTCTAACGAAAACCCTCAAGAGTATTATGAGAATCCACCTCGCATTGATGCTGCAAGGAGCCTCATTTGTAAGCAGGGTTCTTGTTGGTCTCAGCTTAAGTTCACAGGGATGGTGCAGTGGGGCACACGCCGACAAGTTCGGTTCTTGGGCCGTCACGAGGAGCAAAAGGTTGAATCTTTACCAAAAATGTGTGAGGGAAAAAGGGTCAGAGTTGAAGTCAGAGAAGAAGGGGGCAGTGAGAAGAAGAGGAAGAAAGGTGAAGAAGAGGAAATGGAGGGTACAAAGGCAGGGTCTTTAGGGGTTATGATGAGGGTGACTCGTCAATGTAAGAAAACTCATATTCAAAATGTGAGTAGTAGCAGCAGCGGGGTTAAAAAATTTAAGAAAGCAAAGAATGACGATTCCAAGAATAAGAAGGAACTCGTGGTTTATAAGGACAACAAGCGAAAAATCACGATTAACAGGTGGTCTGCTGAGAGGTTTAATTTGGCAGAGGAGAACATATTGAAGGTAATGAAAGAGAAAGAAGCTGTATATGGGAACCCGATATTGAGGCCAGACTTGAGAACAGAAGCAAGAAAGTATATTGGTGATACGGGTCTTCTGGATCATTTGCTGAAGCACATGGCTGGAAAATTGGCACCAGGAGGTGCTGAGAGATTCAGAAGGCGACACAATGCTGAGGGTGCAATGGAGTACTGGTTAGAAAGTGCTGATCTTGTTGATATCAGAAAGAAAGCAGGGGTTCAAGACCCTTATTGGACTCCTCCCCCTGGGTGGAAGCTTGGGGACAGCATTTCACAGGATTATGTCACGCAGAGAGAACTCAGAGAGGTCAAGGATGAAATCCTCAAGCTGAAACAAGAGATGAGGTATTTGGCATCAAAGAAGGGAGAGGAGGAGGCACTAGCCATTGTGACTACTCCTAGCTTCTGGTTGTCTAGTTTGAATTCGGAGGACTATGGCTCCTTGGCTCCAAAGCAGGAAATTTATGCGGAGTTGGTGAGTAAGAAGGCTAAACTAGAGGAACAATTAAAGGAAATTTCACTGACTTTGAGTGGCATGGAGGGGCAACTGAAAATGCTGAAACCAACAACAGTAGAAGAACAAACAGTGTCAGAATGGGAAACTCCACCAGCACTTTTGCCTGGGCCAATAACATCAGAGGCAGAAAACATTGGGGGAGAGACAAGGAAGGAAAAGAAAATCAACAACAACAAAGAAACAAAATCAGCGGAGGAAACACAAATGCAAGAGGACAAGGAGGCAAAGATAAAAAGGCTGAAAAGTGGTTTCCAAATTTGCAAGTCACAGGGTACCTTTGTGTGGCCAAACATAGGCCTGTCTCCGCAAGTTGTGACCACCCATGATGATGATGATCACACTGTGGTCCCAACCCCACCATCAGCTTCCTCTTCTACAACTTCAGCTCGAAAACTCACCATCTCCACACCCCAAACTCAACCCTTGCCTCTACAAAGTTTGACCCATCCTTCTTCCCCTGTGAAGCCACTTGCTGAGAGGCGCCCTGTGAGCACAGCTACTTTGACCCATGTTACTGGCCAATTCTCACCATCAGGGTCGACCCCAAGATCCAAAATCACCACCCCCACCATCACTATTAACCTCAATGAGACACCCCTTACACTCACACCCTAG 1758 0.463 MGMDMAIKALVRSIPTEEFAQRRNSWSFWVSSPSNENPQEYYENPPRIDAARSLICKQGSCWSQLKFTGMVQWGTRRQVRFLGRHEEQKVESLPKMCEGKRVRVEVREEGGSEKKRKKGEEEEMEGTKAGSLGVMMRVTRQCKKTHIQNVSSSSSGVKKFKKAKNDDSKNKKELVVYKDNKRKITINRWSAERFNLAEENILKVMKEKEAVYGNPILRPDLRTEARKYIGDTGLLDHLLKHMAGKLAPGGAERFRRRHNAEGAMEYWLESADLVDIRKKAGVQDPYWTPPPGWKLGDSISQDYVTQRELREVKDEILKLKQEMRYLASKKGEEEALAIVTTPSFWLSSLNSEDYGSLAPKQEIYAELVSKKAKLEEQLKEISLTLSGMEGQLKMLKPTTVEEQTVSEWETPPALLPGPITSEAENIGGETRKEKKINNNKETKSAEETQMQEDKEAKIKRLKSGFQICKSQGTFVWPNIGLSPQVVTTHDDDDHTVVPTPPSASSSTTSARKLTISTPQTQPLPLQSLTHPSSPVKPLAERRPVSTATLTHVTGQFSPSGSTPRSKITTPTITINLNETPLTLTP* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1930 585 Coils Coil 364 391 - -
Gso8g1930 585 MobiDBLite consensus disorder prediction 486 572 - -
Gso8g1930 585 MobiDBLite consensus disorder prediction 408 455 - -
Gso8g1930 585 PANTHER PROTEIN DYAD 1 565 IPR044221 GO:0007131|GO:0051177|GO:0051321
Gso8g1930 585 MobiDBLite consensus disorder prediction 546 572 - -
Gso8g1930 585 Coils Coil 309 329 - -
Gso8g1930 585 MobiDBLite consensus disorder prediction 105 129 - -
Gso8g1930 585 MobiDBLite consensus disorder prediction 426 455 - -
Gso8g1930 585 MobiDBLite consensus disorder prediction 498 533 - -
Gso8g1930 585 MobiDBLite consensus disorder prediction 105 127 - -
Gso8g1930 585 MobiDBLite consensus disorder prediction 146 165 - -
Gso8g1930 585 PANTHER PROTEIN DYAD 1 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1930 Gso-Chr8 19205571 19208840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1930 177 269 PHD Transcription Factor Family AT5G22260 36.000 5.59e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1930 - - gsj:114424588 1059.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1830 15 37605498 37610311 Gso8g1930 8 19205571 19208840 GST