Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1902 ATGGACCCGAAAACCCCATATGAGAATTCTTCCAATTTTGATTCTTTCATGTTCAACTCGTCATCACCTAGAAGTGACATGTCCATTCAGTCTAGGAGTTCTGGCAGGGACAACTCCACCCGTGAAGTGAGTTTCGGCCACACAGGATCCAAGCCTGTGAGGCATGGGTCAAATTCTGAAGGTCTAAGCATGTCTCAGAAGGAAATCAGTGATGAGGATGCAAGGTTGGTTTATGTTGATGATCCTGAGAAGACAAATGAAAGGCTCAAATTCGCGGGGAATTCGATTCGAACCGGGAAGTACTCCATCTTCACCTTTCTTCCAAGGAATTTGTTTGAACAGTTTCGTAGAGTTGCTTATATTTACTTCCTTGTAATTGCCATTCTCAATCAGCTCCCTCAGTTGGCTGTCTTTGGGAGGGGTGTTTCCATTATGCCATTGACCTTTGTCCTTGTTGTTACTGCTGTGAAGGATGCATTTGAGGACTGGAGGAAGCACAGGTCAGACAAAATTGAGAACAACAGGTTAGCATTGGTTTTGGTTAATGGTCAGTTTCAAGAGAAGAAGTGGAAGGATGTCAGGGTTGGGGAGGTCATTAAAATAAGTGCAAATGAAACAATTCCTTGTGATATTGTGTTGCTATCAACTAGTGACCCTACTGGGGTTGCTTATGTGCAGACTATTAATCTGGATGGAGAGTCTAATTTGAAGACTAGGTACACGAAACAAGAGACTCAATCTATGTTTCCTGAAAAGGAGAGGTTGAATGGATTGATTGTGTGTGAGAAACCCAATAGGAATATATATGGGTTTCAGGGTTATATGGAAATTGATGGAAAGAGATTGTCTCTTGGATCCTCCAACATTGTCATTAGAGGCTGCCAGCTCAAGAATACTAATTGGGCACTTGGCGTTGCCGTGTATTGTGGCAGAGAGACCAAAGCTATGCTCAACAGCTCTGGAGCTCCATCGAAAAGGAGCCTTCTCGAGACTCGCATGAACTCTGAGATCATTATGCTTTCTTTCTTTCTTATAGCTTTGTGCACAGTCACCTCAGTTTGTGTTGCTGTTTGGTTAAAGCGCCACAAGGATGAGTTGAATCTCTCCCCGTATTATAGGAAAATGGATGTTTCAGAGGGGGAAGAGGATAGCTATAAATATTATGGATGGGTACTGGAAATTGTTTTCACTTTCCTCATGTCAATTATAGTGTTTCAGATTATGATCCCCATATCCTTGTACATTTCCATGGAGCTTGTCCGTGTTGGTCAGGCATACTTCATGATCCGAGACTCGAGAATGTATGATAAGGCGACAGATTCAGGATTTCAGTGCAGGGCTTTGAATATTAATGAAGATTTGGGCCAAATTAAATATGTCTTTTCTGACAAAACTGGTACACTGACTGAGAACAATATGGAGTTTCAATGCGCGAGCATCTTGGGGTTTGATTACAGTTCTGCAAAAATGGGTCCTGAGAATGAGCAAGTTGAATACTCTGTTCAAGAGGATGGGAAGGTCTTTAAGCCAAAGATGAGGGTGAAAGTTAACCAAGAGCTTTTGCAATTATCAAAAAGTGGATTTGCAAATAGAGAGGGGAAACAGATTTATGATTTCTTTCTAGCATTGGCAGCCTGCAATACCATTGTGCCTCTTGTTGTTGACACATCCGATCCTATGGTCAAGCTAATAGATTACCAAGGGGAATCACCAGATGAACAAGCGTTGGCTTATGCTGCCGCTGCCTATGGTTTTATGCTTATTGAACGAACCTCAGGTCACATAGTCGTTAATATTCATGGAGAAAAACAAAGGTTCAATGTCTTAGGTTTGCATGAATTTGATAGTGATCGAAAAAGGATGACAGTTATATTAGGGTACAGTAACAATTCTGTGAAACTTTTTGTTAAAGGGGCAGATACATCCATGTTTAGTGTGATAGACAAATCATTGAACTCAGATATACTACAAGCAACTGAAACCCATCTTCACTCTTATTCCTCTGTGGGTTTGAGGACACTTGTTATTGGCATGCGTGACTTGAATGCTTCAGAATTTGAGCAATGGCACTCTGCCTTTGAGGCAGCAAGTACTGCTTTGATTGGTAGGGCCTCTATGCTTCGCAAGGTTGCTATCAATGTAGAGAACAATCTCTGCATATTGGGTGCAACTGCTATTGAAGATAAACTGCAGCAAGGCGTACCAGAATCCATTGAGTCTCTAAGGACTGCAGGTATTAAAGTATGGGTCTTGACTGGGGACAAACAGCAAACTGCCATATCAATTGGATGCTCCTCGAAGCTCCTAACGAGCAACATGACTCAAATTATAATTAATACCAACAATAGAGAGTCATGTAGAAGATGTTTGCAAGACGCCCTTGTCATGTCTAGAAAACACATGACTGTGCCTGGGGTTACTCACAATTCTGAAGGAAGATCAGATGCTGTTTCAACTCCATTAGCCTTGATTATTGATGGTACCAGCCTTGTTTATATTCTTGACAGCGAGCTTGAAGAAGAGCTCTTTCAACTAGCAAATAGATGTTCTGTTGTTCTCTGTTGTCGAGTGGCTCCGCTGCAGAAGGCTGGGATTGTAGCCCTTGTGAAGAATAGGACCGATGACATGACACTAGCCATTGGAGATGGTGCTAATGACGTATCAATGATCCAAATGGCTCATGTTGGAGTTGGAATCAGTGGACAGGAGGGTCGGCAAGCTGTAATGGCTTCAGATTTTGCAATTGGGCAGTTTAGGCTTTTAGTTCCTCTCTTATTAATACATGGGCATTGGAATTACCAACGACTGGGTTACATGATAATATACAACTTCTACAGAAATGCTATCTTTGTTCTTGTCCTATTTTGGTATGTGCTCTTTACTGCTTTCTCTTTGACAACTGCTATAAATGAATGGAGCAGCGTGTTATATTCAATAATTTACTCTGCAGTTCCAACTATTGTTGTTGGTGTTCTTGACAAGGATCTTAGTAAAAGGACTCTCCTAAAGCATCCTCAGCTTTATGGGGCTGGGCTGAGACAGGAGGCCTACAACAAAAAGTTGTTTTGGTTGTCAATGGCCGATACTTTGTGGCAAAGCATTGCTGTTTTCTTTACTCCCCTAATCGCATATTGGGGAACCACTGAAGATGTAGCAAGCATAGGAGATCTTTGGACTCTTTCAGTGGTTATTTTGGTTAATTTGCACTTGGCCATGGATGTCATCAGGTGGAATTGGATTACGCATGCAGCAATTTGGGGCTCTATAGTTGCAACTTTCATTTGTATCATTATTATTGATGCTATACCAGCCTTTCCTGGTTTCTGGGCTATCTTTCATGCTGCAGGCACTGGATTGTTCTGGCTATGTTTGCTCGGAACTGTGATAGCCGCATTACTTCCTCGATTGGTTGTAAAATATATGAATCAGTATTATTTTCCCAGCGACATTCAGATTTCGAGAGAAGCTGAGAAGTTTGGGAATCCAAGAGACAATGGAGTTGGACAGATAGAAATGCTTCCTGTTTCAGATGGTTCACCAAGATAA 3546 0.4171 MDPKTPYENSSNFDSFMFNSSSPRSDMSIQSRSSGRDNSTREVSFGHTGSKPVRHGSNSEGLSMSQKEISDEDARLVYVDDPEKTNERLKFAGNSIRTGKYSIFTFLPRNLFEQFRRVAYIYFLVIAILNQLPQLAVFGRGVSIMPLTFVLVVTAVKDAFEDWRKHRSDKIENNRLALVLVNGQFQEKKWKDVRVGEVIKISANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYTKQETQSMFPEKERLNGLIVCEKPNRNIYGFQGYMEIDGKRLSLGSSNIVIRGCQLKNTNWALGVAVYCGRETKAMLNSSGAPSKRSLLETRMNSEIIMLSFFLIALCTVTSVCVAVWLKRHKDELNLSPYYRKMDVSEGEEDSYKYYGWVLEIVFTFLMSIIVFQIMIPISLYISMELVRVGQAYFMIRDSRMYDKATDSGFQCRALNINEDLGQIKYVFSDKTGTLTENNMEFQCASILGFDYSSAKMGPENEQVEYSVQEDGKVFKPKMRVKVNQELLQLSKSGFANREGKQIYDFFLALAACNTIVPLVVDTSDPMVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVVNIHGEKQRFNVLGLHEFDSDRKRMTVILGYSNNSVKLFVKGADTSMFSVIDKSLNSDILQATETHLHSYSSVGLRTLVIGMRDLNASEFEQWHSAFEAASTALIGRASMLRKVAINVENNLCILGATAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQQTAISIGCSSKLLTSNMTQIIINTNNRESCRRCLQDALVMSRKHMTVPGVTHNSEGRSDAVSTPLALIIDGTSLVYILDSELEEELFQLANRCSVVLCCRVAPLQKAGIVALVKNRTDDMTLAIGDGANDVSMIQMAHVGVGISGQEGRQAVMASDFAIGQFRLLVPLLLIHGHWNYQRLGYMIIYNFYRNAIFVLVLFWYVLFTAFSLTTAINEWSSVLYSIIYSAVPTIVVGVLDKDLSKRTLLKHPQLYGAGLRQEAYNKKLFWLSMADTLWQSIAVFFTPLIAYWGTTEDVASIGDLWTLSVVILVNLHLAMDVIRWNWITHAAIWGSIVATFICIIIIDAIPAFPGFWAIFHAAGTGLFWLCLLGTVIAALLPRLVVKYMNQYYFPSDIQISREAEKFGNPRDNGVGQIEMLPVSDGSPR* 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1902 1181 Pfam Phospholipid-translocating P-type ATPase C-terminal 908 1148 IPR032630 -
Gso8g1902 1181 SFLD Haloacid Dehalogenase 444 931 - -
Gso8g1902 1181 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 12 1181 - -
Gso8g1902 1181 MobiDBLite consensus disorder prediction 1161 1181 - -
Gso8g1902 1181 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 12 1181 - -
Gso8g1902 1181 SUPERFAMILY Calcium ATPase, transmembrane domain M 87 1147 IPR023298 -
Gso8g1902 1181 Pfam E1-E2 ATPase 177 419 - -
Gso8g1902 1181 Pfam Cation transport ATPase (P-type) 569 644 - -
Gso8g1902 1181 MobiDBLite consensus disorder prediction 1 65 - -
Gso8g1902 1181 CDD P-type_ATPase_APLT_Dnf-like 93 1040 - -
Gso8g1902 1181 Gene3D - 717 918 IPR023214 -
Gso8g1902 1181 PRINTS P-type cation-transporting ATPase superfamily signature 461 475 - -
Gso8g1902 1181 PRINTS P-type cation-transporting ATPase superfamily signature 880 899 - -
Gso8g1902 1181 Gene3D - 144 318 - -
Gso8g1902 1181 Gene3D - 560 699 IPR023299 GO:0000166
Gso8g1902 1181 SFLD p-type atpase 444 931 IPR044492 -
Gso8g1902 1181 MobiDBLite consensus disorder prediction 1 68 - -
Gso8g1902 1181 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 467 733 IPR023299 GO:0000166
Gso8g1902 1181 Pfam Phospholipid-translocating ATPase N-terminal 77 142 IPR032631 -
Gso8g1902 1181 SUPERFAMILY Calcium ATPase, transduction domain A 174 315 IPR008250 -
Gso8g1902 1181 SUPERFAMILY HAD-like 456 935 IPR036412 -
Gso8g1902 1181 ProSitePatterns E1-E2 ATPases phosphorylation site. 463 469 IPR018303 -
Gso8g1902 1181 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 91 1155 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gso8g1902 1181 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 851 965 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1902 Gso-Chr8 18759314 18765884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1902 1 1181 Primary Pumps ATPases AT5G04930 67.595 0.0 1686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1902 K14802 - gmx:100791888 2306.18