Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1892 ATGGCCGAAGTCATGAACGTGCCTCCCGAATCCCTCGACAAATCCCCTTCCTCCTCCGCTCCCCCTCCGCCTCCGCCTCCGCCGCCGCATTACCCTCCCCGGCGAAGGGACCGGCGAGACGACAGGGATTTCGATCGCCCTCCCAACCGCCGCGGCGATTACTATGACCGGAACGCGTCGTCCCCGTCGTCACCGCGAGACAGAGACCCGCTGCCACCGCGAGACAGAGACCGAGACAGAGACAGTGACCTCAAGCGCCGCCGCAGCCCCAGCCCTCCCCACCGCGAACGGCGGCATTCTCCGCCTCGACGCTTGCCTCCGCCGTACAAGCGGTCGCGCAGGGGCAGTCCTCGCGGCGGGTACGGACCTGATGATAGCAGACATGGATATGATTATTATGGTGGTTATGAACGGGGAATGGGTGGAAGAGGTGGTTATGCAGATGAGAAGTCCTATGGCAGGTTTGGGCCACGTTCTTCAGGGGGGTATCAAAATGGGATTTCCGGTATAGAATCCAATCGTGGTTACGGAGACATGCCAAGTGGTGGTGCACAAAGAGAGGGGTTGATGTCTTATAAACAGTTCATTCAGGAGCTTGAGGACGATATACTACCAGCTGAAGCGGAGCGTAGGTATCAAGAATACAAATCAGAGTATATCTCGACCCAAAAACGAGCTTATTTTAATGCTCATAAGGATGAGGAATGGTTGAAAGATAAATATCATCCAACAAATTTGGTTACAGTCATTGAAAGGAGGAATGAAAATGCTCGACAGCTAGCAAAGGATTTTTTGCTTGATTTACAGAGTGGAACATTAGAACTAAATCCTGGTTTAAATGCCTCTATAAGTAAATCAGGGCAAGCTAGTGAACCAAATTCGGAGGAGGAAGCAGACACTGGAGGTAAACGAAGAAGGCAGGGTAGGGGATCCAATAAAGAAAATGATTTCTCAGCTGCTCCAAAGGCTCATCCTATCAGTACTGAACCAAGACGGATACAAGCAGATGTTCAACAGGCTCAGGCCCTTGTTCGCAAGCTTGACACAGAAAAGGGGATTGAAGATAATATTTTATGCATCAGTGATCACAATAGAAATGATGATAAGGCTCACAGTGCATCTGTGGCTCCCATAGTAATTATACGAGGCCTAACATCTGTTAAGGGTTTAGAAGGTGATGAGCTTCTGGATACACTCGTTACCTATCTTTGGCAGATTCATGGTGTAGATTATTATGGCATGATTGAGACTAATGAAGCTAAGGGCTTTAGGCATGTGAGACCGGAAGGGACAGCGCATGAAGTAGTAGCAGGTAAATCAGGTTCTGAATGGGAAAAGAAACTTGACTTATTTTGGCAAGGAAGGCTGAATGGTCAGGATCCCTTGGAAGTAATGACTGCTAAGGAGAAGATAGATGCTGCAGCAATGGAAGTATTGGATCCATATGTTCGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGTTGTGGAGCTATGGGCTGCACAAAGCTTTTTCATGCTACTGAATTTGTGCTCAAACATCTGAAGCTCAAACACCCAGAGCTTGTTGTGGAACAGACTTCCAAAGTACGAGAGGATCTCTATTTTCAAAATTACATGAATGATAAAGATGCTCCTGGTGGAATGCCCATCATGCAGCAACCTCAGAAGGGCAGGCCTTTAAAGCGAAGAGTTCTTGAGGGCCGATTGAGAGATGATCGTGGTAATCGACGAGACCATGACCAGAGTGACAGAATGAATGGAGATAGGCCTGATAATTCCCCATCCCATGAAGCCATGATGGGAAACCGTGATGAAACAATGTATGATTCATATGCAGGGCCAGGTGTACCGCCATTTGCCTCTGATATACCTCCTCCACCAGTGTTGATGCCTGTCCCTGGTGCTGGGCCTTTGGGACCCTTTGTTCCTGCTCCCCCAGAAGTTGCAATGCAGATGTTAAGAGATCAAGGAGGATCATCATACGATGCCTCTGGAAGAAAGATGCACTCTGGCCCTCCTATGGGTGGAGGATCATCAATAATTGCTGTTCCTCCAACTTTTAGACCAGATCCTCGGCGAATGCGAAGCTATCAAGATCTGGATGCCCCAGAGGATGAGGTCACTGTGATAGACTATCGGAGTTTGTAG 2154 0.4847 MAEVMNVPPESLDKSPSSSAPPPPPPPPPHYPPRRRDRRDDRDFDRPPNRRGDYYDRNASSPSSPRDRDPLPPRDRDRDRDSDLKRRRSPSPPHRERRHSPPRRLPPPYKRSRRGSPRGGYGPDDSRHGYDYYGGYERGMGGRGGYADEKSYGRFGPRSSGGYQNGISGIESNRGYGDMPSGGAQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLVTVIERRNENARQLAKDFLLDLQSGTLELNPGLNASISKSGQASEPNSEEEADTGGKRRRQGRGSNKENDFSAAPKAHPISTEPRRIQADVQQAQALVRKLDTEKGIEDNILCISDHNRNDDKAHSASVAPIVIIRGLTSVKGLEGDELLDTLVTYLWQIHGVDYYGMIETNEAKGFRHVRPEGTAHEVVAGKSGSEWEKKLDLFWQGRLNGQDPLEVMTAKEKIDAAAMEVLDPYVRKIRDEKYGWKYGCGAMGCTKLFHATEFVLKHLKLKHPELVVEQTSKVREDLYFQNYMNDKDAPGGMPIMQQPQKGRPLKRRVLEGRLRDDRGNRRDHDQSDRMNGDRPDNSPSHEAMMGNRDETMYDSYAGPGVPPFASDIPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLRDQGGSSYDASGRKMHSGPPMGGGSSIIAVPPTFRPDPRRMRSYQDLDAPEDEVTVIDYRSL* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1892 717 MobiDBLite consensus disorder prediction 542 602 - -
Gso8g1892 717 Pfam SERRATE/Ars2, N-terminal domain 193 274 IPR021933 -
Gso8g1892 717 MobiDBLite consensus disorder prediction 279 333 - -
Gso8g1892 717 MobiDBLite consensus disorder prediction 91 111 - -
Gso8g1892 717 MobiDBLite consensus disorder prediction 561 593 - -
Gso8g1892 717 MobiDBLite consensus disorder prediction 658 703 - -
Gso8g1892 717 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 717 IPR039727 GO:0006397
Gso8g1892 717 MobiDBLite consensus disorder prediction 1 164 - -
Gso8g1892 717 Pfam Arsenite-resistance protein 2 439 617 IPR007042 -
Gso8g1892 717 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 717 - -
Gso8g1892 717 MobiDBLite consensus disorder prediction 68 90 - -
Gso8g1892 717 MobiDBLite consensus disorder prediction 279 295 - -
Gso8g1892 717 MobiDBLite consensus disorder prediction 15 30 - -
Gso8g1892 717 MobiDBLite consensus disorder prediction 31 53 - -
Gso8g1892 717 MobiDBLite consensus disorder prediction 296 312 - -
Gso8g1892 717 ProSitePatterns Zinc finger C2H2 type domain signature. 497 520 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1892 Gso-Chr8 18592015 18599788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1892 47 717 C2H2 Transcription Factor Family AT2G27100 59.772 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1892 - - gmx:100788714 1211.82