Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1890 ATGGGGACCCAAACTATGGGGACTCATGGTGGTGGTGGAGACAGTAATGGGAAACAGTCACCACTCCAGCCTCTGGTGCGGCAAAACTCAATGTACAGTCTCACACTTGATGAGGTTCAGAATCAATTGGGCGATTTGGGGAAGCCACTAACTAGTATGAACATTGATGAGCTTCTAAAAAATGTGTGGACCGCTGAGGCAAGTCAGACCATTGGTATGGACAATGAGGGCACAGCACAAGCTAGTCAAGCTTCTCTGCAGCGTCAGGCTAGTCTGTCATTAACCGGTGCACTAAGCAAGAAGACTGTAGATGAGGTTTGGAGAGATATCCAACAAAACAAAATCGTAGGGGAGAAGAAGTTCCAAGACAGACATCCTACTTTGGGAGAAATGACATTGGAGGATTTCTTGGTGAAAGCAGGTGTTGTTGCAGGTGCATCTTCTAATAGAACAAATACCAGTACTATAGCTGGAGTTGATTCAAACGTGGCAGTACCACAGTTTCCTTCACAAGCACAGTGGATACAATATCCACAAGCACAATATCAGCATCCACCACAAAGTTTAATGGGGATGTATATGCCTAGCCAAGGTATGGTACAGCCATTACACATGGGGGCTGGAGCTTCATTAGATGTTTCGTTTGCAGATAATCAGATGGCAATGCCATCGTCTCTGATGGGAACAATGTCAGATACGCAGACTCCTGGAAGAAAAAAGAGCACTTCTGAGGACATGATAGAGAAGACTGTTGAGAGGAGACAGAAAAGGATGATAAAAAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCATACACAAATGAATTGGAGAATAAAGTCTCGCGCCTGGAAGAGGAAAATGAAAGGCTGAGGAAACGAAAGGAGCTAGAGCAGATGTTGTCATGTGCACCCCCTCCTGAACCTAAATATCAACTTCGCCGAATAGCATCAGCTCCATTCTGA 972 0.4537 MGTQTMGTHGGGGDSNGKQSPLQPLVRQNSMYSLTLDEVQNQLGDLGKPLTSMNIDELLKNVWTAEASQTIGMDNEGTAQASQASLQRQASLSLTGALSKKTVDEVWRDIQQNKIVGEKKFQDRHPTLGEMTLEDFLVKAGVVAGASSNRTNTSTIAGVDSNVAVPQFPSQAQWIQYPQAQYQHPPQSLMGMYMPSQGMVQPLHMGAGASLDVSFADNQMAMPSSLMGTMSDTQTPGRKKSTSEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKELEQMLSCAPPPEPKYQLRRIASAPF* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1890 323 MobiDBLite consensus disorder prediction 259 323 - -
Gso8g1890 323 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 321 IPR043452 GO:0003700|GO:0045893
Gso8g1890 323 MobiDBLite consensus disorder prediction 259 301 - -
Gso8g1890 323 MobiDBLite consensus disorder prediction 225 246 - -
Gso8g1890 323 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 2-RELATED 19 321 - -
Gso8g1890 323 CDD bZIP_plant_BZIP46 253 307 - -
Gso8g1890 323 SMART brlzneu 249 305 IPR004827 GO:0003700|GO:0006355
Gso8g1890 323 MobiDBLite consensus disorder prediction 1 23 - -
Gso8g1890 323 Coils Coil 269 303 - -
Gso8g1890 323 Gene3D - 251 305 - -
Gso8g1890 323 Pfam bZIP transcription factor 253 297 IPR004827 GO:0003700|GO:0006355
Gso8g1890 323 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 256 271 IPR004827 GO:0003700|GO:0006355
Gso8g1890 323 SUPERFAMILY Leucine zipper domain 253 298 IPR046347 GO:0003700|GO:0006355
Gso8g1890 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 251 296 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1890 Gso-Chr8 18545797 18551388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1890 18 323 bZIP Transcription Factor Family AT3G56850 54.062 1.65e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso8g1890 bZIP_1 8e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1890 K14432 - gmx:100101875 595.119