Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1888 ATGAAACTGCAGGCACATATTCCGGGGGAGATGTCAGGACAGGTACCTAATCAAGCAGGGTCTCAATTGTCTGGTCTGACCCAACTGAATGGGAATGCACTACCTCACCAGATGCCACCTTTAGGGGGTGTACCGCGTTCAACAATTAATATGGATCCGGATTTTCTTAGAGCTCGCACTTTTATTCATGATAAGATCTTTGATATGTTGTTGCAACGACAACAGCAGCCAGTTACAGATGTACAGAGAAAGAAGCTTAAGGATCTTGCAAAACGCTTGGAGGAGGGCATGTTAAAAGCTGCTCTCTCTAAGGAGGATTATATGAACTTGGATACACTGGAGAGTCGTTTATCTAATTTCCTCCGACGAGCATCTATGAATAATCACAACCAACAATATCCGCAGCCTGTTAACTCTTCCCCAATTGGTACAATGATACCAACCCCTGGTTTGTCTAATGGTTATCAGCAGTCTTCTACCAGTTTTTCTGTTTCCTCGGGGGGGAGCATTTCATCAATGGGGTTGCAGAGAATTGCTAGCCAGATGATTCCCACTCCTGGATTCACAGTCAGCAGTAATCACTCACACATGAATATAGATTCTAATAATACTAATGGTGGTGCCTTTTCCAGTGTAGAGTCTACTATGGTACCCCTGTCTCAGCTACAGCAGCAGAAGCAGCATGTTGGTGGCCAAAATAGTCATATATTGCAGAACCTTAGCGGCCAAATGGGTAGTGGAATGAGATCTGGTTTACTACAGAAGCCATTTACAAACTCAAATGGTGCTATAAATTGTGGGTCAGGCATGATTGGAAACAATATGCAGCTTGCAAATGAACCTGGCACTTCTTCTGATAGCTATGCCTCAACTTATGCTAATTCTCCTAAACATTTGCAGCAGCACTTTGATCAAAATCAGAAACCAGTAGTGCAGGGTGATGGGTATGGAATGAATAATGTTGACAATTTTGCTTCTGGAAACTTTTATGCATCTGCGACATCCTCTGGGTCTATGATGAACAATCAGAACACTAATTCAGTTAAATTACCATCAATGCCCAAAACTAGCTCATTGATAAGTGGCTCGAATTTGCACGGTATGCAGCAGGCTGCTCATATAAAGTCCCAACCAATTAACCAGCTAGAAAAGTTGAATTTTCAGTCTTCATTGACTTCAAGAGATGGCTTTCTGCATTCTCAACAGCAGTATCAGCAAAGGCCTCAACAATTGCAACAGCCAGATCAGTATTCGCAGCAGCAATTTCAATCTATGCAAAGTCAACAGCCTCAGCATGTGATCAACAGTGACACATTCAGTCAGTCTCAGCTATCTTCCAATATAGAAAACCGAGTGAAGCCTGAACCTGGAATTGAACACCATAAAGTGCCCAATTCTCATGTCTCTGAACAGTTTCACATATCTGAGATGCAGAGTCAGTTCCAGCAGAACTCATCTGAAGATTGCTCTAGGGGTGCTCAACATCTTCAATTCCCATCTGGTCACCATGATTTATCATCATCAACACCTCAAAATTCACAACAAATGTTGCACCATCATCAATTGGTTGCAGAGTCTCAAAATAATTTCAACAAATCTGTAATTCTAAACCAATGGCCTCAATCACAAGATTGTAACCACATACTTGACAGTATTTCACATGATCAACATCTCCACATGGATTTTCATCAAAGAATATCTGGGCAAGATGAAGCTCAATGCAATAATTTATCGTCAGATGGATCTATTATTGATCGGGCTGTTCTTTCTAGAGGCTCAGCTGAGCAGCTGGACTCTGGAATTGCTATAAAAAAGGCGCACAGGAATCAACAGAGGTGGCTTTTATTTCTACTTCATGCTCGACGTTGTTCTGCCCCTGAAGGACGATGCAAAGAACGGTTTTGTTCTAGTGCACAGAAGTTATGCAAGCACATAGAGGGATGCACCCTGCGCCATTGTCTATATCCTCGTTGCCATCATACCAGGGTGTTGCTTCATCATTTTATGAACTGCAAGGATCCATGTTGCCCTGTTTGTGTTTTTGTGAGAAAGTATCGACGTGCATTTCAACTCAAGCCTCAGATTCGGCCAGAAGCTGAATCAAGCTTGCCAACTGCAGTGAATGGATCCTCTAAACCTTACAATATTGTAGGTGCATCGCCTAGATTGATCTCGAAGCCTCCCTTAGTTGTTGAAACTTCAGAGGACTTGCACCCATCTATAAAGCGTATAAAGATTGAGCATTGTGCCCAGCCTATTAATCCTGAAAATGATCATTCTGCTTCATCTTTTACTGCAAATTGTGAATCTCTTGTTTCCAGGGATGCTCAGTCTCAACGCCAAGCTTATCCCAATGTTGAGAAGTCTATCTCAATCCAATCTGAGCTTACAGAAGTTAAGGCTGAAGCTTCTGCACATGTGGTACATGAAAAACTCAGTGAGATGAAAATGGATAACAGTAATGCAGATTATAAAACGCCTAGTGCTGAACCTGTCAAATATGAGGAACCTCCTAATTTAGCTAGGCCTGAAAATATGAAAACTGAGAAAGAAACTGGACAAGACAGACAAGAAAATGTTGTGCAGGCATCTGAAAATGCAGCTGGAACCAAATCTGGCAAGCCAAAAATAAAAGGAGTCTCATTAACTGAATTATTTACTCCAGAGCAAGTCAGGGAACATATCACTGGTCTCAGGCAATGGGTTGGCCAGAGCAAGTCAAAAGCAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCCTGTCAATTGTGTGCTGTTGAGAAGCTTACCTTTGAACCACCGCCTATTTATTGCACAACTTGTGGGGTTCGCATTAAACGCAATAATATGTATTATACCACGGGCACTGGTGACACACGACATTATTTTTGTCTTCCTTGCTATAATGATGCTCGTACAGAGAACATCATTGTTGATGGGACTCCCATTGCCAAGTCAAGATTGGAAAAGAAGAAGAATGATGAGGAAACTGAGGAATGGTGGGTTCAATGTGATAAGTGTGAAGCATGGCAACATCAAATTTGTGCCTTATTTAATGGTAGAAGAAATGATGGTGGACAAGCTGAATATACTTGCCCTAACTGCTATATTCTAGAGGTAGAAAGAGGAGAGCGCAAGCCCTTACCGCAAAGTGCTGTTCTTGGAGCCAAGGATTTGCCGAGAACTATTCTTAGTGATCACATAGAACAGCGATTATTTAAACGGCTAAAGCAAGAAAGACTAGAAAGGGCAAGGCTTCAAGGAAAAAGTTATGATGAGATTCCTGGGGCTGATGCTCTTGTTGTAAGAGTTGTGTCATCTGTTGACAAAAAGTTAGAAGTGAAACCGCGGTTTCTGGAGATTTTTCAGGAAGAGAATTACCCAACAGAATTTCCATATAAATCAAAGGTAGTTTTGTTGTTTCAAAAGATAGAAGGTGTGGAAGTTTGCCTATTTGGCATGTATGTTCAAGAATTTGGATCTGAATGTCAATTTCCTAATCAGCGCCGCGTGTATCTTTCATATTTGGATTCTGTTAAGTATTTTAGGCCCGAGGTTAAAGCAGTGACTGGAGAGGCTCTTCGGACTTTTGTTTACCATGAAATTCTGATTGGATACCTTGAATATTGCAAGAAACGTGGTTTTACAAGCTGCTATATCTGGGCCTGTCCTCCATTAAAGGGAGAAGATTATATTTTATATTGCCATCCAGAAATTCAGAAAACACCAAAATCCGATAAGCTACGTGAATGGTATCTGGCCATGCTAAGAAAAGCTTCCAAGGAGAATGTTGTGGTTGATCTCACCAACTTGTACGATCATTTCTTTGTATCTACTGGTGAATGTAGGGCTAAGGTTACCGCTGCAAGACTCCCATATTTTGATGGTGACTACTGGCCTGGGGCTGCAGAGGATTTAATTTATCAGCTTCGCCAAGAGGAAGATGGAAGAAAACAAAATAAAAAGGGAACAACTAAAAAGACTATAACAAAAAGGGCTTTAAAAGCGTCTGGTCAGTCAGATCTCTCAGGAAATGCCTCAAAGGACCTGCTCCTTATGCACAAACTTGGTGAAACCATTTCCCCAATGAAGGAAGATTTTATTATGGTTCATTTGCAGCATGCATGTACTAGCTGTTGTATTTTAATGGTGTCTGGCAACCGTTGGGTTTGCAACCAGTGCAAAAATTTTCATATTTGTGATAGGTGTTACGAAGCAGAACTAAAGCGTGAGGAGAGAGAAAGACATCCTATTAACCACAGGGAGAAACATACTCTTTATCCGGTTGAAATTACTGATGTTCCTTCTGATACAAAGGACAAAGATGATATTCTTGAGAGCGAATTCTTTGACACTAGACAGGCATTTCTGAGTCTCTGCCAGGGAAATCATTACCAGTATGATACACTAAGGCGGGCCAAGCATTCCTCAATGATGGTTCTCTATCATCTTCATAATCCAACGGCTCCAGCATTTGTGACAACTTGCAATATATGCTATCTTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAGGTTTGCCCTGAGTATGATGTATGCAATGCTTGTTATCAAAAGGATGGAGGTATTGATCATCCTCATAAGTTGACAAATCATCCATCCATGGTGGACCGTGATGCTCAGAACACAGAAGCAAGGGAGGTTCGAGTAGTGCAGCTACGGAAAATGCTTGATCTCCTTGTTCATGCATCCCAATGTCGTTCTGCACATTGCCAATATCCCAATTGTCGCAAGGTGAAGGGGCTTTTCCGCCATGGCATGCACTGCAAAACACGGGCTTCTGGAGGTTGTGTTCTTTGCAAGAAAATGTGGTATTTACTTCAACTTCATGCTCGTGCTTGCAAAGAATCTGAATGCCACGTACCACGTTGCAGAGATTTAAAGGAACATCTAAGGAGGCTGCAGCAACAGTCTGATTCACGGCGTAGAGCTGCTGTGATGGAAATGATGAGGCAGAGAGCCGCAGAAGTTGCTAACAATGCTGGATGA 5019 0.4186 MKLQAHIPGEMSGQVPNQAGSQLSGLTQLNGNALPHQMPPLGGVPRSTINMDPDFLRARTFIHDKIFDMLLQRQQQPVTDVQRKKLKDLAKRLEEGMLKAALSKEDYMNLDTLESRLSNFLRRASMNNHNQQYPQPVNSSPIGTMIPTPGLSNGYQQSSTSFSVSSGGSISSMGLQRIASQMIPTPGFTVSSNHSHMNIDSNNTNGGAFSSVESTMVPLSQLQQQKQHVGGQNSHILQNLSGQMGSGMRSGLLQKPFTNSNGAINCGSGMIGNNMQLANEPGTSSDSYASTYANSPKHLQQHFDQNQKPVVQGDGYGMNNVDNFASGNFYASATSSGSMMNNQNTNSVKLPSMPKTSSLISGSNLHGMQQAAHIKSQPINQLEKLNFQSSLTSRDGFLHSQQQYQQRPQQLQQPDQYSQQQFQSMQSQQPQHVINSDTFSQSQLSSNIENRVKPEPGIEHHKVPNSHVSEQFHISEMQSQFQQNSSEDCSRGAQHLQFPSGHHDLSSSTPQNSQQMLHHHQLVAESQNNFNKSVILNQWPQSQDCNHILDSISHDQHLHMDFHQRISGQDEAQCNNLSSDGSIIDRAVLSRGSAEQLDSGIAIKKAHRNQQRWLLFLLHARRCSAPEGRCKERFCSSAQKLCKHIEGCTLRHCLYPRCHHTRVLLHHFMNCKDPCCPVCVFVRKYRRAFQLKPQIRPEAESSLPTAVNGSSKPYNIVGASPRLISKPPLVVETSEDLHPSIKRIKIEHCAQPINPENDHSASSFTANCESLVSRDAQSQRQAYPNVEKSISIQSELTEVKAEASAHVVHEKLSEMKMDNSNADYKTPSAEPVKYEEPPNLARPENMKTEKETGQDRQENVVQASENAAGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTTGTGDTRHYFCLPCYNDARTENIIVDGTPIAKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYILEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFKRLKQERLERARLQGKSYDEIPGADALVVRVVSSVDKKLEVKPRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKASKENVVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACTSCCILMVSGNRWVCNQCKNFHICDRCYEAELKREERERHPINHREKHTLYPVEITDVPSDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKDGGIDHPHKLTNHPSMVDRDAQNTEAREVRVVQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG* 1673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1888 1672 MobiDBLite consensus disorder prediction 399 433 - -
Gso8g1888 1672 MobiDBLite consensus disorder prediction 1320 1344 - -
Gso8g1888 1672 PANTHER CBP/P300-RELATED 159 1671 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gso8g1888 1672 MobiDBLite consensus disorder prediction 840 856 - -
Gso8g1888 1672 SMART zz_5 1493 1539 IPR000433 GO:0008270
Gso8g1888 1672 SMART zz_5 1373 1417 IPR000433 GO:0008270
Gso8g1888 1672 Gene3D - 1370 1431 IPR043145 -
Gso8g1888 1672 SUPERFAMILY FYVE/PHD zinc finger 1000 1040 IPR011011 -
Gso8g1888 1672 Pfam Zinc finger, ZZ type 1496 1535 IPR000433 GO:0008270
Gso8g1888 1672 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 991 1039 IPR013083 -
Gso8g1888 1672 ProSiteProfiles Zinc finger ZZ-type profile. 1374 1437 IPR000433 GO:0008270
Gso8g1888 1672 SUPERFAMILY RING/U-box 1475 1543 - -
Gso8g1888 1672 Pfam PHD-finger 997 1039 IPR019787 -
Gso8g1888 1672 PANTHER ZINC FINGER, TAZ-TYPE-RELATED 159 1671 - -
Gso8g1888 1672 CDD PHD_HAC_like 966 1038 - -
Gso8g1888 1672 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1056 1492 IPR031162 GO:0004402
Gso8g1888 1672 MobiDBLite consensus disorder prediction 818 859 - -
Gso8g1888 1672 Gene3D TAZ domain 1552 1668 IPR035898 -
Gso8g1888 1672 Pfam Histone acetylation protein 1096 1315 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gso8g1888 1672 ProSitePatterns Zinc finger ZZ-type signature. 1499 1526 IPR000433 GO:0008270
Gso8g1888 1672 ProSiteProfiles Zinc finger ZZ-type profile. 1494 1553 IPR000433 GO:0008270
Gso8g1888 1672 Gene3D - 1493 1547 IPR043145 -
Gso8g1888 1672 SUPERFAMILY TAZ domain 1557 1639 IPR035898 -
Gso8g1888 1672 Gene3D TAZ domain 601 687 IPR035898 -
Gso8g1888 1672 ProSitePatterns Zinc finger PHD-type signature. 967 1038 IPR019786 -
Gso8g1888 1672 ProSiteProfiles Zinc finger TAZ-type profile. 601 682 IPR000197 -
Gso8g1888 1672 MobiDBLite consensus disorder prediction 491 511 - -
Gso8g1888 1672 MobiDBLite consensus disorder prediction 341 373 - -
Gso8g1888 1672 ProSiteProfiles Zinc finger TAZ-type profile. 1554 1637 IPR000197 -
Gso8g1888 1672 Pfam TAZ zinc finger 611 679 IPR000197 -
Gso8g1888 1672 Pfam TAZ zinc finger 1564 1634 IPR000197 -
Gso8g1888 1672 SUPERFAMILY RING/U-box 1354 1439 - -
Gso8g1888 1672 SUPERFAMILY TAZ domain 607 686 IPR035898 -
Gso8g1888 1672 SMART KAT11_2 1089 1386 IPR013178 GO:0004402|GO:0006355|GO:0016573
Gso8g1888 1672 SMART TAZ_2 604 682 IPR000197 -
Gso8g1888 1672 SMART TAZ_2 1557 1635 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1888 Gso-Chr8 18488607 18504346 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gso8g1888 HAT_KAT11 2.3e-31 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1888 K04498 - gmx:100787114 3252.23