Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1877 ATGAAACTGGCTACCCCTAAAATAATTAGAAAGATCCCAAGCCCTCTGAAGTTGGTATCCAGAAGCTCAAGTTCAGCAGCAAAGAAGCCACTATTGGTGTCAGGATCAGGACAACCGTCGTCGTCGTCGGATGGAAGTAGCAAGCAACAGGTGGTTCCCAAAGGGTCCCTGGCTGTTTACGTGGGTCCCGACCTTCGAAGGTTTGTCATTCCAGTAAGCTTCTTGGCCATGCCAGACTTCAAGGTTTTGATGGAGTCGGTGGCAGAGGAATATGGTTGCGATCACGATGGCGCTATTCAAATCCCCTGCGATGAAGACTATTTTCAGCAAATCTTGATGTCTTGTTCCCAAAGACAACGGATCATATCCCCTAAGAAACTAATTCCTAACATCCCACTCATATGTACTACTCATTAA 417 0.4652 MKLATPKIIRKIPSPLKLVSRSSSSAAKKPLLVSGSGQPSSSSDGSSKQQVVPKGSLAVYVGPDLRRFVIPVSFLAMPDFKVLMESVAEEYGCDHDGAIQIPCDEDYFQQILMSCSQRQRIISPKKLIPNIPLICTTH* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1877 138 PANTHER OS02G0143300 PROTEIN 37 119 - -
Gso8g1877 138 MobiDBLite consensus disorder prediction 17 52 - -
Gso8g1877 138 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 119 IPR003676 GO:0009733
Gso8g1877 138 Pfam Auxin responsive protein 36 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1877 Gso-Chr8 18335832 18336248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1877 52 112 Calmodulin-binding Proteins AT3G43120 60.656 1.89e-22 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1877 K14488 - gmx:102663803 224.942