Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1876 ATGGATTCAAAGAAGTGTAACAAGATCAGAGAAGTTGTTAGGCTTCAACAAATCCTCAAGAAATGGAAGAAAGTTGCAACTGCTTCCAACAACAACAACAGCTCCAGCAGTAAAGGCATCAAGTTTTTGAAGCGAACCCTTTCATTCACAGATGTTTCTTCCACCAACACCAATCAAGACATCGTTCCAAAAGGGTTCCTTGCTGTTTGTGTAGGGAAAGAGCTCAAGAGATTCATTATTCCCACGGATTACTTGAGACACCAAGCATTTGAGATGTTGCTCCAAGAAGCAGAAGAGGAATTTGGTTTCCAGCAAGAGGGTGTCCTCAAAATCCCATGCCAAGTATCAGTCTTCGAGAAAATATTGAATGCCGTGGAAGACAACAAACAACCCTTGGATGAGTTTGGCTTCAATGCGTCAGATTGTGAAGTCACTTCCCCTCATCATGCTCAACCGTGTACATAG 465 0.4258 MDSKKCNKIREVVRLQQILKKWKKVATASNNNNSSSSKGIKFLKRTLSFTDVSSTNTNQDIVPKGFLAVCVGKELKRFIIPTDYLRHQAFEMLLQEAEEEFGFQQEGVLKIPCQVSVFEKILNAVEDNKQPLDEFGFNASDCEVTSPHHAQPCT* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1876 154 PANTHER OSJNBA0060N03.10 PROTEIN 5 147 - -
Gso8g1876 154 Pfam Auxin responsive protein 20 124 IPR003676 GO:0009733
Gso8g1876 154 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 147 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1876 Gso-Chr8 18334508 18335055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1876 1 153 Calmodulin-binding Proteins AT2G24400 54.118 2.95e-53 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1876 K14488 - gmx:100782489 288.115