Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1864 ATGGAAAAGAAGAAGTACCCCATCGGGGAGGAGCATTACCTTCTCTACGAGGAGATTGGCCAGGGGGTCAGTGCCTCTGTCCACCGCGCTCTCTGCCTCCCCTTCAACGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGTGACAACTGCGATCTGAACAACGTTTCTCGCGAGGCCCAGACAATGATCCTGGTGGACCACCCCAACGTCCTCAAATCGCACTGCTCCTTCGTCAGCGATCACAATCTGTGGGTTGTCATGCCCTTCATGTCCGGCGGTTCATGCCTCCACATACTCAAAGCCGCCCACCCCGACGGTTTCGAGGAGGTGGTCATTGCTACCGTTCTCAAAGAGGTCTTGAAGGGTTTGGAGTACCTTCACCACCACGGCCACATCCACCGCGACGTCAAGGCCGGCAACATTCTCATCGATTCACGCGGGGCCGTCAAGCTCGGCGACTTTGGTGTCTCTGCCTGCCTCTTCGATTCCGGTGACCGCCAACGCACAAGGAATACATTTGTAGGAACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTTCACGGCTACAATTTCAAAGCTGACATCTGGTCGTTTGGTATAACCGCCTTGGAGCTTGCACATGGCCATGCCCCTTTCTCAAAGTTTCCACCAATGAAGGTACTGCTCATGACTCTCCAAAATGCACCCCCTGGCCTTGACTACGAAAGGGATAGGAAGTTCAGTAAGTCTTTTAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGACCCTCTGCAAGCAAGTTGTTAAAACACTCCTTCTTTAAGCAGGCTCGCTCCAGTGATACTATAGTCAAAAAACTTTTGGAGGGGTTGCCTGCTTTAGGTGACCGAATGGAAGCTCTAAAGAGAAAAGAAGAAGATATGCTCGCACAAAAGAAAATGCCTGATGGAAAGATGGAGGAATTATCACAGAACGAATACAAACGAGGAATTAGTGGTTGGAACTTCAATCTTGACGACATGAAGGCTCAGGCTTCCTTGATCCACGATTTCGACGATGCTATGTCCGATATCAACCATGCAGGAAGTTCAAGTTCTTTATCTACACTTGATTCACTAGATAAGCAATTGCCAAGTGCAATTCACAAACCTTCTCGATCTGCTGATATGGAAGAGAATGATGAGATGCGACGTCAATTAGCTTCTGCTCTCCTAGTTGATTCTGCAGTAAACGATGCCAAAACTAGGTTCGAAAAATCCGATGATGACTCTAGCATCGCCAGTTCAAGCCATGAACCACAAACTTCTTCATCCTGTCCAGATGATCATGTGAACAATCATTTGGGTGAAAAATCTGATATGGAAAATGGTGGAAGATCCGTGGAGGGAATGGCTACCCATTATTATCATAGAAGAGGATGTTCATCCAGCATCTTACCTGAAGCTACTCTTCTTCCTATTCGGGCAGAAAGTGAGAAACCACAAAATCTGCCCCACAACGTTTCAAGTTGCAATGCAACTTCAGTTCCACAGACAGGAGAGGACGTGCTTACCGAACTTCCTTCTAGAGTCTCAAAATCATCAGCTAATTCTGATGACACTGATGAGAAATCAAAGGTGCCAGTTGTACAGCAGAGAGGGCGTTTTAAGGTTACATCTGAGAATGTTGACCCAGAAAAGGTTTTTAGCCAGCATAATACTGCTTCTATACATCCTACTTTGCCATTACTACCGGCATCTGATGCCACATCATCAAATCTTTCTGGCTACTCTCTGTTTCCTGTGTTACACTCTGTACTGCAGACAAATATTCTTCAAAGGGAGGGCATTTTAAGTTTAATGAAGCAAATTACTGTCGGTGACTCTTCAGCTGATGGCACATGCAACCCAGCACAGGTAGCAGCAACAGAGAAATCTTTGCTTGAAGCAGCTCACGAGAGGGAAAAGGAGTTACTTCATGAGATAACAGATTTGCAGTGGAGGCTTATCTGTACCCAGGAGGAGCTTCAAAAGTTGAAAACAGAAAACGCCCAGAAGTGA 2040 0.4681 MEKKKYPIGEEHYLLYEEIGQGVSASVHRALCLPFNEVVAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAHPDGFEEVVIATVLKEVLKGLEYLHHHGHIHRDVKAGNILIDSRGAVKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSSDTIVKKLLEGLPALGDRMEALKRKEEDMLAQKKMPDGKMEELSQNEYKRGISGWNFNLDDMKAQASLIHDFDDAMSDINHAGSSSSLSTLDSLDKQLPSAIHKPSRSADMEENDEMRRQLASALLVDSAVNDAKTRFEKSDDDSSIASSSHEPQTSSSCPDDHVNNHLGEKSDMENGGRSVEGMATHYYHRRGCSSSILPEATLLPIRAESEKPQNLPHNVSSCNATSVPQTGEDVLTELPSRVSKSSANSDDTDEKSKVPVVQQRGRFKVTSENVDPEKVFSQHNTASIHPTLPLLPASDATSSNLSGYSLFPVLHSVLQTNILQREGILSLMKQITVGDSSADGTCNPAQVAATEKSLLEAAHEREKELLHEITDLQWRLICTQEELQKLKTENAQK* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1864 679 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 678 - -
Gso8g1864 679 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Gso8g1864 679 SUPERFAMILY Protein kinase-like (PK-like) 11 275 IPR011009 -
Gso8g1864 679 SMART serkin_6 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1864 679 MobiDBLite consensus disorder prediction 495 515 - -
Gso8g1864 679 Coils Coil 655 675 - -
Gso8g1864 679 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 678 - -
Gso8g1864 679 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Gso8g1864 679 MobiDBLite consensus disorder prediction 427 443 - -
Gso8g1864 679 MobiDBLite consensus disorder prediction 493 541 - -
Gso8g1864 679 Pfam Protein kinase domain 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1864 679 CDD STKc_OSR1_SPAK 11 274 - -
Gso8g1864 679 MobiDBLite consensus disorder prediction 416 460 - -
Gso8g1864 679 Gene3D Transferase(Phosphotransferase) domain 1 94 327 - -
Gso8g1864 679 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1864 Gso-Chr8 18237066 18244270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1864 1 661 MAP Kinase Kinase Kinase Kinase AT1G79640 63.703 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gso8g1864 Pkinase 1.3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1864 K08835 - gmx:100780339 1338.55