Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1854 ATGGAGAGCCTTGAAGCAGCTAGAAAGTGCTTGACAACTAGTTTGGAAACTTCGAGCGCCATTGCCTCTGCACTTGATGAATCTCGATCGAGATTGCAGCTACTTAACCAGAGATATCTGTCCTTGCAAGCTTCCCTTAGACCCATCTCGAAGCAGAAGTGCTCATTTGTCAACATTGACCAAGGTATAGACAGTGTTCTATGTTCTGCTGCTGCACTCCTCAAGGTTTCTGACTCTGTTCAGCACTTGGAGCATTCTCTCTTAACAGATCCCTCTTCTGATCTATACACCTATGTCTCAGACACAAAGAAGCTCGAGGAAGCATTGAAGCTTCTAACTGATAATTGCAGGTTAGCAGTTGGCTGGTTGAAGGACGTCTTTGAGTTCTTACAAGACAAAGCAATCACCAATGAGCTTTACCTGTTGAATGTGAAGAAATCTTTGAGAATATTGCAAGAATTGCAGGTCAAGGAGGAAAGTTCTCGCCTTGATGGAGGTCTTCTTAGTACTGCTTTTGACAAACTAGAACTTGAGTTCCACAGGCTTATCATAGCAAACTCCATGCCTCTTCCTTTGGTTTCGTTGACATCACACATCGGTCAGCAAGCCAGTATTGCCAAACAAGCTTTGCCATTGACAAGTTCTTTAGCAGGGGAGTTGCATGCCATCATTGAGAGATTACATGCTAACGGCAGGCTAGACAAGTGTCAATCTATCTATGTTGAAGTTCGAGGTATGAATGCTCGTCGAAGCTTGAAGACTTTAGATTTGAGTTACCTTGAGATTCTAACAGCTGAATTTGAGGGTGCACAGTGTATAGAGAGCTACATAGACCAATGGGGTTGCCATTTGGAGTTGGTTGTGAAGCAACTGCTCAAGACCGAGTGCAGGCTCTCAGCTATTGTCTTTGAGAAAATCGGTCCAGAAGCATGGATGGGGTGTTTTGCAAAGATTGCCATTGAATCAGGAATTCTTTCTTTTATTCAATTTGGAAGGATTGTTACTGAGAGGAAGAATGACCCCTTCAAGTTGTTGAACCTGCTGTCCATATTCAAGGTCTTAAATGGTCTAAGGCTAATATTCAACCAGCTTTTCAGTGTGAAAGCTTGTAAAGAAATTAGGACTGTGACTGAGGATCTCATAAAAAAAGTAGTCAATGGTGCCAGTGAGGTATTTTGGCAACTTCCAGCACAAGTTAGGTTGCAAAGACCGACTTCTCCTCCCTCTGATGGCAGTGTTCCCAGGCTGGTAAGCTTTGTAATTGATTACTGCAATCAGCTGCTCGGGGATGCCTATAGGCCACATTTGACACAGGTTTTGGGAATACATCTTAGCTGGAGAAAGGAAGCATACGAAGAGGGTATTGTTTTCTGCCAAATATATAACGCAATTAAGGAGGTTGCGGTAAATTTGGATTCTTGGTCAAAGGCCTATGAAGATATCACATTGTCCTACCTTTTTATGATGAATAATCACTGTCATTTCTGCAATTTGAGGGGTACTGTGCTTGGAAATATGATGGGAGATTCTTGGTTAAAAGCACACGAGCAATATAAGGACTATTATGCTGCACTTTATTTGAGGAAAAGCTGGGGAAAGCTTCTATCTATTCTCGTAGTTCAAAGGGACATACTTTCACCCACCAGTGCAAGTGTGACAAGCCAAGACTTGACAAAGAGACTAAATGCTTTCAATCTAGCTTTTGATGAAAGGTACAAAAAGCAATCTAATTGGGTAATCTCCGATGAGATCTTGAGGGAAAATGTATGCAAGCATTTGGTGGAAGGTATTATACCAATTTATAGGGCCTACGTCAAGAATTATTGTTTGTCAATAGAAAATGATGCTAAGGTTGACAAGCATATGAAATATACGGCACAGAGTTTGGAGAACAAGATTAGGTCTCTGTTTCAGCCCAGGCAGAGGAAGGGTAGTAGCAGTAAACAGACAGACTTGATTAGTAAAATAAAAGAAGTAAGTCATCAGTTTCGCTTGACTCTAGCTGCTCTATAA 2013 0.4168 MESLEAARKCLTTSLETSSAIASALDESRSRLQLLNQRYLSLQASLRPISKQKCSFVNIDQGIDSVLCSAAALLKVSDSVQHLEHSLLTDPSSDLYTYVSDTKKLEEALKLLTDNCRLAVGWLKDVFEFLQDKAITNELYLLNVKKSLRILQELQVKEESSRLDGGLLSTAFDKLELEFHRLIIANSMPLPLVSLTSHIGQQASIAKQALPLTSSLAGELHAIIERLHANGRLDKCQSIYVEVRGMNARRSLKTLDLSYLEILTAEFEGAQCIESYIDQWGCHLELVVKQLLKTECRLSAIVFEKIGPEAWMGCFAKIAIESGILSFIQFGRIVTERKNDPFKLLNLLSIFKVLNGLRLIFNQLFSVKACKEIRTVTEDLIKKVVNGASEVFWQLPAQVRLQRPTSPPSDGSVPRLVSFVIDYCNQLLGDAYRPHLTQVLGIHLSWRKEAYEEGIVFCQIYNAIKEVAVNLDSWSKAYEDITLSYLFMMNNHCHFCNLRGTVLGNMMGDSWLKAHEQYKDYYAALYLRKSWGKLLSILVVQRDILSPTSASVTSQDLTKRLNAFNLAFDERYKKQSNWVISDEILRENVCKHLVEGIIPIYRAYVKNYCLSIENDAKVDKHMKYTAQSLENKIRSLFQPRQRKGSSSKQTDLISKIKEVSHQFRLTLAAL* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1854 670 SUPERFAMILY Cullin repeat-like 73 637 IPR016159 -
Gso8g1854 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 662 IPR004140 GO:0000145|GO:0006887
Gso8g1854 670 Pfam Exo70 exocyst complex subunit 279 634 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso8g1854 670 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 662 - -
Gso8g1854 670 Gene3D Exocyst complex component Exo70 129 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1854 Gso-Chr8 18166066 18168078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1854 1 657 EXO70 exocyst subunit family AT4G31540 50.075 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1854 K07195 - gmx:100777662 1296.95