Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1851 ATGAACGGCCACCATACGGTTAACATCGCTAACATTAACAGGCACCCCAACGAAGATGACGACAATGCCCACCCTCCCTCCTCCGACAACAACCACCATGATGATGACGAAGAAGAACTCGTTGATCCCGATGATCCTTTTGACATTACTCAAACCAAGAACGCATCGCACGACACGCTTCGCCGTTGGAGACAAGCAGCACTCGTGCTCAATGCGTCCAGGCGTTTTAGATATACTTTGGACTTGAGAAAGGAAGAAGAGAAAGAGCAAAAGAAACACTTGATTAGAGCCCATGCACAAGTCATAAGAGCAGCACTGCTTTTCAGATTGGCCGGTGAACGTGAACTAGTGATAAGTACAGCAGCGTCACCCCCAACTCCAGCCGGTGACTATGATATTGGGCTCGAACAACTTGTTTCAATGGCTAAGGATCAGAATATTTCTGCTTTACAACAATATGGAGGGATTAGAGGCTTATCAAATTTAATAAAATCTAATCCGGATAAAGGTGTTAGTGGAGATGATGCTGATCTGTTAAAAAGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAAGGAAGAAGTTTCTGGAGGTTTTTATGGGAAGCTTGGCAAGATCTGACTCTCATAATACTGATAATAGCTGCTGCGGTGTCATTGGCACTTGGAATAAAAACAGAGGGTTTGGCTGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTCTTCTTGTCATTGTAGTTACAGCTGTCAGTGATTATCGGCAATCTCTGCAGTTTCAGAATTTGAATGCAGAAAAACAAAATATACAATTGGAGGTTATTAGAGGTGGGAGAACAATTAAAATTTCAATATTTGATATTGTTGTTGGTGATGTTATACCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTATTAATCACGGGCCATTCACTTGCAATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCATAAGGATCACAAAACACCATTTTTTATGTCTGGTTGCAAAGTAGCAGATGGAGTTGGTCTTATGCTGGTAACTGGTGTTGGTATAAATACCGAATGGGGATTGTTGATGGCTAGTATCTCAGAGGACAATGGAGAAGAGACTCCATTACAGGTACGCTTGAATGGAGTAGCAACTTTTATTGGTGTAGTTGGGCTTAGTGTAGCTGTTTTAGTGCTTGCTGTCCTCTTGGGCAGATACTTTTCCGGCCATACCAAAGATTTAGATGGAAATGTTGAATTTGTTGCCGGAAAGACTAGTCTTAGCAATGCAGTAGATGGGGTCATCAAAATTTTTACCATTGCAGTCACAATTGTGGTCGTTGCAGTGCCTGAAGGTCTACCTTTGGCTGTTACCTTAACCTTGGCATACTCAATGCGGAAAATGATGGCAGACAAGGCCTTGGTACGGCGGCTATCAGCCTGTGAAACTATGGGCTCTGCCACAACAATTTGCAGTGATAAGACAGGAACATTGACCTTAAATCAGATGACTGTAGTTGAGGCATATGTTGGGAGCACAAAAGTAAATCCACCGGATGACTCATCAAAGTTGCATCCAAAAGCATTGTCTCTGATAAATGAGGGCATTGCACAGAATACAACCGGAAATGTTTTTGTACCCAAGGATGGTGGAGAAACAGAGGTATCCGGATCTCCTACAGAGAAGGCTATTCTTTCATGGGCAGTCAAGTTGGGTATGAATTTTGATGTTATAAGATCAAATTCAACAGTTCTCCATGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCTTTGAAGCTGGGGGATTCTGGAATACATATACATTGGAAGGGAGCCGCAGAGATAGTTCTAGGAACATGTACTCAATATCTTGATTCAGATGGTCAATTGCAATCCATTGAAGAAGATAAGAAGGCTTTTTTCAAGGATGCTATTGATGACATGGCTGCTCGCAGCTTGCGTTGTGTAGCCATTGCATACAGATCCTATGAACTAGACAAAGTTCCATCTAGTGAGCAGGATTTAGACCAATGGTCCTTACCGGAATATGAGCTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGTGTCAAAGATGCTGTAAAAGTATGCACTGATGCTGGTGTTAAGGTACGCATGGTTACTGGAGACAACCTTCAAACAGCAAAGGCAATAGCTTTGGAGTGTGGCATACTGGCTTCAATTGAAGATGCTGTTGAGCCGAATATAATTGAAGGAAAGAAATTCCGTGAACTATCTGAAAAGGAAAGAGAAGATATTGCCAAGAAAATAACTGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCTCTACGTAAAGGAGGGGAAGTTGTTGCGGTCACAGGAGATGGCACCAATGATGCTCCTGCCCTACATGAGGCAGATATTGGTCTTTCTATGGGCATCTCCGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCCTAGACGACAACTTTGCATCAGTAGTAAAGGTTGTCCGCTGGGGCCGCTCTGTATATGCAAATATTCAGAAATTTATCCAGTTCCAGCTTACAGTTAATGTTGCTGCTCTTGTAATAAATGTTGTGGCAGCAATAACTTCTGGTGATGTTCCTTTAAATGCAGTGCAGCTTTTGTGGGTTAACCTTATCATGGATACACTTGGGGCGCTTGCACTGGCTACTGAACCACCAACAGACCGCCTAATGCACAGATCACCAGTTGGCCGAAGAGAACCTCTTATAACAAATATCATGTGGAGAAACTTGATCGTACAGGCTGCCTATCAAATCGCAGTTCTCCTCGTCCTTAACTTTTGTGGTGAAAGTATTCTACCAAAACAAAATACCAGAGCTGATGCCTTTCAAGTGAAGAATACTTTAATATTCAACGCGTTCGTCCTGTGCCAAATATTCAATGAATTCAATGCTCGGAAACCCGATGAAATGAATGTTTTCCGTGGAGTGACCAAGAACAAACTTTTCGTGGGAATTGTTGGAGTGACCTTTATACTTCAGATAATCATCATCGAGTTCCTTGGAAAGTTCACCTCAACGGTGAGGCTTGATTGGAAGCTATGGCTTGCTTCTCTTGGTATTGGATTTGTCAGTTGGCCCCTTGCTATAGTCGGAAAATTCATTCCAGTTCCCAAAACACCATTGGCTCGTTACTTCTTGAAGCCACTCAGGCGATTGAAGAGGTCTAGGTCTCGTGCTACACAATAG 3279 0.4254 MNGHHTVNIANINRHPNEDDDNAHPPSSDNNHHDDDEEELVDPDDPFDITQTKNASHDTLRRWRQAALVLNASRRFRYTLDLRKEEEKEQKKHLIRAHAQVIRAALLFRLAGERELVISTAASPPTPAGDYDIGLEQLVSMAKDQNISALQQYGGIRGLSNLIKSNPDKGVSGDDADLLKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAAVSLALGIKTEGLAEGWYDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEVIRGGRTIKISIFDIVVGDVIPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDHKTPFFMSGCKVADGVGLMLVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGVVGLSVAVLVLAVLLGRYFSGHTKDLDGNVEFVAGKTSLSNAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGSTKVNPPDDSSKLHPKALSLINEGIAQNTTGNVFVPKDGGETEVSGSPTEKAILSWAVKLGMNFDVIRSNSTVLHVFPFNSEKKRGGVALKLGDSGIHIHWKGAAEIVLGTCTQYLDSDGQLQSIEEDKKAFFKDAIDDMAARSLRCVAIAYRSYELDKVPSSEQDLDQWSLPEYELVLLAIVGIKDPCRPGVKDAVKVCTDAGVKVRMVTGDNLQTAKAIALECGILASIEDAVEPNIIEGKKFRELSEKEREDIAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAITSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDRLMHRSPVGRREPLITNIMWRNLIVQAAYQIAVLLVLNFCGESILPKQNTRADAFQVKNTLIFNAFVLCQIFNEFNARKPDEMNVFRGVTKNKLFVGIVGVTFILQIIIIEFLGKFTSTVRLDWKLWLASLGIGFVSWPLAIVGKFIPVPKTPLARYFLKPLRRLKRSRSRATQ* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1851 1092 Gene3D - 177 372 - -
Gso8g1851 1092 ProSitePatterns E1-E2 ATPases phosphorylation site. 498 504 IPR018303 -
Gso8g1851 1092 Gene3D - 55 109 - -
Gso8g1851 1092 MobiDBLite consensus disorder prediction 1 56 - -
Gso8g1851 1092 Gene3D - 493 849 IPR023214 -
Gso8g1851 1092 Gene3D - 506 704 IPR023299 GO:0000166
Gso8g1851 1092 Pfam Cation transporting ATPase, C-terminus 889 1064 IPR006068 -
Gso8g1851 1092 Pfam Ca2+-ATPase N terminal autoinhibitory domain 44 87 IPR024750 GO:0005516
Gso8g1851 1092 Pfam E1-E2 ATPase 273 474 - -
Gso8g1851 1092 PRINTS P-type cation-transporting ATPase superfamily signature 320 334 - -
Gso8g1851 1092 PRINTS P-type cation-transporting ATPase superfamily signature 496 510 - -
Gso8g1851 1092 PRINTS P-type cation-transporting ATPase superfamily signature 697 708 - -
Gso8g1851 1092 PRINTS P-type cation-transporting ATPase superfamily signature 719 729 - -
Gso8g1851 1092 PRINTS P-type cation-transporting ATPase superfamily signature 804 823 - -
Gso8g1851 1092 PRINTS P-type cation-transporting ATPase superfamily signature 828 840 - -
Gso8g1851 1092 SMART Cation_ATPase_N_a_2 152 226 IPR004014 -
Gso8g1851 1092 CDD P-type_ATPase_Ca_PMCA-like 178 937 - -
Gso8g1851 1092 SFLD p-type atpase 478 856 IPR044492 -
Gso8g1851 1092 PANTHER CATION TRANSPORTING ATPASE 44 1082 - -
Gso8g1851 1092 SUPERFAMILY HAD-like 494 909 IPR036412 -
Gso8g1851 1092 MobiDBLite consensus disorder prediction 14 34 - -
Gso8g1851 1092 SUPERFAMILY Calcium ATPase, transduction domain A 274 369 IPR008250 -
Gso8g1851 1092 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 144 1067 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Gso8g1851 1092 Pfam Cation transporter/ATPase, N-terminus 155 221 IPR004014 -
Gso8g1851 1092 SUPERFAMILY Calcium ATPase, transmembrane domain M 154 1067 IPR023298 -
Gso8g1851 1092 Gene3D - 204 1056 - -
Gso8g1851 1092 SFLD C1.7: P-type atpase like 478 856 - -
Gso8g1851 1092 Pfam haloacid dehalogenase-like hydrolase 493 818 - -
Gso8g1851 1092 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 503 701 IPR023299 GO:0000166
Gso8g1851 1092 PRINTS Sodium/potassium-transporting ATPase signature 239 259 - -
Gso8g1851 1092 PRINTS Sodium/potassium-transporting ATPase signature 489 510 - -
Gso8g1851 1092 PRINTS Sodium/potassium-transporting ATPase signature 615 633 - -
Gso8g1851 1092 PANTHER CALCIUM-TRANSPORTING ATPASE 44 1082 - -
Gso8g1851 1092 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 433 526 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso8g1851 1092 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 771 885 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1851 Gso-Chr8 18129442 18149035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1851 21 1088 Primary Pumps ATPases AT3G21180 77.456 0.0 1674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1851 K01537 - gmx:100777143 2021.13