Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1845 ATGAAGGGTAAGACTTGCGAGCTTTGTGATCAACAAGCTTCTCTCTATTGTCCCTCCGATTCCGCATTTCTCTGCTCCGACTGCGACGCCGCCGTGCACGCCGCCAACTTTCTCGTAGCTCGTCACCTCCGCCGCCTCCTCTGCTCCAAATGCAACCGTTTCGCCGGATTTCACATCTCCTCCGGCGCTATATCCCGCCACCTCTCGTCCACCTGCAGCTCTTGCTCCCCGGAGAATCCTTCCGCTGACTACTCCGATTCTCTCCCTTCCTCTTCTACCTGCGTCTCCAGTTCCGAGTCTTGCTCCACGAAGCAGATTAAGGCGGAGAAGAAGAGGAGTTGGTCGGGTTCCTACGTGACCGACGACGCATCTCCGGCGGCGAAGAAGCGGCAGAGGAGTGGAGGATCGGAGGAGGTGTTTGAGAAATGGAGCAGAGAGATAGGGTTAGGGTTAGGGTTAGGGGTAAACGGAAATCGCGTGGCGTCGAACGCTCTGAGTGTGTGCCTGGGAAAGTGGAGGTGGCTTCCGTTCAGGGTGGCTGCTGCGACGTCGTTTTGGTTGGGGCTGAGATTTTGTGGGGACAGAGGGCTGGCCTCGTGTCAGAATCTGGCGAGGTTGGAGGCAATATCCGGAGTGCCAGTTAAGCTGATTCTGGCCGCACATGGCGACCTGGCACGTGTCTTCACGCACCGCCGCGAATTGCAGGAAGGATGGGGCGAGTCCTAG 726 0.5799 MKGKTCELCDQQASLYCPSDSAFLCSDCDAAVHAANFLVARHLRRLLCSKCNRFAGFHISSGAISRHLSSTCSSCSPENPSADYSDSLPSSSTCVSSSESCSTKQIKAEKKRSWSGSYVTDDASPAAKKRQRSGGSEEVFEKWSREIGLGLGLGVNGNRVASNALSVCLGKWRWLPFRVAAATSFWLGLRFCGDRGLASCQNLARLEAISGVPVKLILAAHGDLARVFTHRRELQEGWGES* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1845 241 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Gso8g1845 241 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 223 - -
Gso8g1845 241 SMART bboxneu5 1 47 IPR000315 GO:0008270
Gso8g1845 241 Pfam B-box zinc finger 3 34 IPR000315 GO:0008270
Gso8g1845 241 CDD Bbox1_BBX-like 6 47 - -
Gso8g1845 241 PANTHER B-BOX ZINC FINGER PROTEIN 32-LIKE 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1845 Gso-Chr8 18065533 18066648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1845 6 241 C2C2-CO-like Transcription Factor Family AT3G21150 29.719 2.39e-20 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso8g1845 zf-B_box 4.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1845 - - gmx:102667703 446.432