Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1833 ATGTTTTTCGTTCCGTGCATGAAAACTACCTCTCCATCTTTGACTTGTTATGTTTCCATATACTGTAATGTGTGTGTAATTCCACTAGTTTGTCTTGTGTGTGAGCAGTTGATAAGAGAGATGATGATCAACGTGAAGGAATCGACCATGGTGCGGCCGGCGGAGGAGGTGGCGCGGCGGGTGGTGTGGAACTCCAACGTGGACCTGGTGGTCCCCAATTTCCACACGCCCAGCGTCTATTTCTATAGGTCCAATGGCGCCACCAACTTTTTCGACGGCAAGGTTATGAAGGAGGCACTGACCAAGGTGCTGGTGCCCTTCTACCCAATGGCTGGGCGGCTCCGGCGAGATGACGACGGTCGCGTCGAGATTGACTGCGACGGTCAGGGGGTGCTTTTCGTGGAGGCCGACACTGGCGCCGTCATCGACGATTTCGGCGATTTCGCTCCCACCCTTGAGCTCCGCCAGCTTATCCCCGCCGTGGATTATTCACAAGGAATAGCATCCTATCCCCTGTTGGTGTTACAGGTAACACATTTCAAATGTGGAGGGGTTTCCCTGGGAGTTGGTATGCAACATCATGTAGCAGATGGAGCCTCTGGTCTGCACTTCATCAATACATGGTCAGATGTGGCTCGTGGCTTGGATGTTTCCATTCCACCATTCATTGATCGTACAATACTTCGTGCCCGTGATCCACCTCGACCCGTTTTTGATCACATTGAATACAAGCCCCCACCAGCCATGAAGACTCAACAAGCTACTAATGCATCAGCAGCTGTCTCTATTTTCAGACTCACGCGTGACCAGCTCAACACACTGAAAGCCAAATCCAAAGAAGATGGCAACACAATCAGCTATAGTTCTTATGAGATGTTGGCGGGTCACGTGTGGCGAAGTGTAAGCAAAGCAAGAGCACTTCCTGATGATCAAGAAACCAAATTGTACATTGCAACTGATGGAAGGTCAAGGTTGCAGCCTCCTACCCCACCCGGTTACTTTGGCAATGTGATTTTCACAACCACACCTATAGCTGTGGCAGGTGATCTGATGTCAAAACCAACATGGTATGCTGCAAGCAGAATCCACAATGCATTGTTACGAATGGACAACGATTATTTGAGATCGGCTCTTGACTATCTAGAACTGCAACCCGATCTAAAAGCGCTGGTTCGTGGGGCTCATACTTTCAAGTGTCCAAACCTTGGTATCACTAGCTGGACTAGGCTTCCAATCCATGATGCTGACTTTGGTTGGGGAAGGCCAATATTCATGGGACCTGGTGGAATTGCATACGAGGGGCTATCTTTCATAATTCCAAGCTCAACCAATGATGGGAGCCTATCTGTGGCCATAGCTCTTCAGCCTGACCATATGAAGCTGTTTAAGGATTTCTTGTATGACATTTGA 1410 0.4915 MFFVPCMKTTSPSLTCYVSIYCNVCVIPLVCLVCEQLIREMMINVKESTMVRPAEEVARRVVWNSNVDLVVPNFHTPSVYFYRSNGATNFFDGKVMKEALTKVLVPFYPMAGRLRRDDDGRVEIDCDGQGVLFVEADTGAVIDDFGDFAPTLELRQLIPAVDYSQGIASYPLLVLQVTHFKCGGVSLGVGMQHHVADGASGLHFINTWSDVARGLDVSIPPFIDRTILRARDPPRPVFDHIEYKPPPAMKTQQATNASAAVSIFRLTRDQLNTLKAKSKEDGNTISYSSYEMLAGHVWRSVSKARALPDDQETKLYIATDGRSRLQPPTPPGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHNALLRMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWTRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSLSVAIALQPDHMKLFKDFLYDI* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1833 469 Pfam Transferase family 41 464 - -
Gso8g1833 469 Gene3D - 37 245 IPR023213 -
Gso8g1833 469 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 44 468 - -
Gso8g1833 469 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 44 468 - -
Gso8g1833 469 Gene3D - 248 469 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1833 Gso-Chr8 17964088 17969391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1833 41 469 Monolignol Biosynthesis Gene Families AT5G48930 77.598 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1833 K13065 - gmx:100806561 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0027 15 248786 250032 Gso8g1833 8 17964088 17969391 PCT
Gso11g3771 11 53320059 53325122 Gso8g1833 8 17964088 17969391 PCT
Gso8g1833 8 17964088 17969391 Gso15g0027 15 248786 250032 PCT
Gso8g1833 8 17964088 17969391 Gso11g3771 11 53320059 53325122 PCT