Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1832 ATGGGGATATACCTCAGCACTCCCAAAACAGAGAAGGCCTCTGAAGATGGTGAGAACGACAAGCTTCGCTTCGGTTTGTCTTCCATGCAGGGCTGGCGTGCTACCATGGAAGATGCTCATGCAGCTCATCCATGTTTGGACGAGTCCACGTCATACTTTGGTGTTTATGATGGCCATGGAGGCAAAGCAGTTTCAAAATTCTGTGCCAAGTATCTACACCTGCAGGTGCTTAAGAGTGAAGCTTACTTAGCTGGAGATTTAGGCACATCTTTACAGAAATCTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAATCTTGGGGGATAAAATAGAAAAGTTGTCTGGTATGCTAGAGGGCTTTATATGGTCTCCCAGGAGTAGTGAAGCCAATGACCGTGTTGATGATTGGGCTTTTGAGGAGGGGCCCCATTCTGATTTTACTGGACCAAACTCTGGAAGCACAGCTTGTGTGGCTGTCGTCCGAGGAAACAAACTTGTTGTTGCTAATGCTGGAGATTCTAGATGTGTCTTATCAAGGAAAGGCCAGGCACACAATTTGTCCAAGGACCACAAACCTGAACTTGAGGCTGAGAAAGACAGGATTCTAAAAGCTGGTGGTTTCATCCAAGTTGGACGGGTCAATGGAAGTTTAAACTTGGCTAGAGCAATTGGAGATATGGAATTCAAGCAGAATAAGTATTTGCCTGCCGAAAAGCAGATTGTAACTGCTGATCCGGACATAACTTCAGTTGAGCTTTGTGATGATGACGAGTTTCTTGTAATAGCTTGTGATGGAATATGGGATTGTATGTCTAGCCAACAGCTTGTAGACTTCATACATCAACAGTTAAAAACAGAGAATAAACTTTCTGCGGTTTGTGAGAGAGTATTTGATAGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATTTTGATTCAGTTCAAAAAACCTTCCAGCAGCCCAGATGCATCATCTGTCATGAACCAGCCTCAATCGTCTGCTCTATCATCTGAAGCTGATAGAAGTTCGGAGACAGTAGAATCGAAGTGA 1092 0.4441 MGIYLSTPKTEKASEDGENDKLRFGLSSMQGWRATMEDAHAAHPCLDESTSYFGVYDGHGGKAVSKFCAKYLHLQVLKSEAYLAGDLGTSLQKSFLRMDEMMRGQRGWRELAILGDKIEKLSGMLEGFIWSPRSSEANDRVDDWAFEEGPHSDFTGPNSGSTACVAVVRGNKLVVANAGDSRCVLSRKGQAHNLSKDHKPELEAEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQIVTADPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHQQLKTENKLSAVCERVFDRCLAPTAGGEGCDNMTMILIQFKKPSSSPDASSVMNQPQSSALSSEADRSSETVESK* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1832 363 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Gso8g1832 363 SMART PP2C_4 13 326 IPR001932 -
Gso8g1832 363 MobiDBLite consensus disorder prediction 331 363 - -
Gso8g1832 363 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Gso8g1832 363 CDD PP2Cc 23 328 IPR001932 -
Gso8g1832 363 MobiDBLite consensus disorder prediction 331 355 - -
Gso8g1832 363 Gene3D - 1 329 IPR036457 -
Gso8g1832 363 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 341 - -
Gso8g1832 363 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Gso8g1832 363 Pfam Protein phosphatase 2C 155 313 IPR001932 -
Gso8g1832 363 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Gso8g1832 363 PANTHER PROTEIN PHOSPHATASE 2C 1 341 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1832 Gso-Chr8 17950981 17957931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1832 1 334 PP2C-type Phosphatase Gene Family AT2G25070 76.119 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1832 K17499 - gmx:100499713 729.554